KEGG   Shigella flexneri 301 (serotype 2a): SF1117
Entry
SF1117            CDS       T00097                                 
Symbol
ycfS
Name
(RefSeq) hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
sfl  Shigella flexneri 301 (serotype 2a)
Pathway
sfl01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sfl00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    SF1117 (ycfS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sfl01002]
    SF1117 (ycfS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sfl01011]
    SF1117 (ycfS)
Peptidases and inhibitors [BR:sfl01002]
 Cysteine peptidases
  Family C82
   SF1117 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:sfl01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   SF1117 (ycfS)
SSDB
Motif
Pfam: Ldt_C YkuD LysM
Other DBs
NCBI-GeneID: 1024089
NCBI-ProteinID: NP_707028
UniProt: A0A0H2UYQ4
LinkDB
Position
complement(1157154..1158116)
AA seq 320 aa
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPASSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq 963 nt   +upstreamnt  +downstreamnt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgagcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaagctaaccccggcgttgatccttac
gtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
atccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
cacggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa

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