Shigella flexneri 301 (serotype 2a): SF3166
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Entry
SF3166 CDS
T00097
Symbol
agaR
Name
(RefSeq) DNA-binding transcriptional regulator AgaR
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
sfl
Shigella flexneri 301 (serotype 2a)
Brite
KEGG Orthology (KO) [BR:
sfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfl03000
]
SF3166 (agaR)
Transcription factors [BR:
sfl03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SF3166 (agaR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_5
AAA_11
HemN_C
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
1027165
NCBI-ProteinID:
NP_708928
UniProt:
A0A0H2V203
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Position
complement(3268398..3269222)
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AA seq
274 aa
AA seq
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MSNTDASGEKRVTGTSERREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGI
AVRAYGGALICDSTTPSVEPSVEDKSALNTAMKRSVAKAAVELIQPGHRVILDSGTTTFE
IARLMRKYTDVIAMTNGMNVANALLEAEGVELLMTGGHLRRQSQSFYGDQAEQSLQNYHF
DMLFLGVDAIDLERGVSTHNEDEARLSRRMCEVAERIIVVTDSSKFNRSSLHKIIDTQRI
DMIIVDEGIPADSLEGLRKAGVEVILVGDHASSL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgacgcttcaggtgagaagcgagtgacaggcaccagcgagcgacgagaa
cagatcattcagcgtctgcgacagcaagggagtgtgcaggttaacgatctgtcggcattg
tatggcgtatctactgtgacgatccgcaatgatctggcgtttctggaaaagcaggggatc
gctgtgcgtgcctatggtggcgcgttgatctgcgatagcacgacgccgtcagtcgagcca
tcagtggaagataaaagcgcactgaacaccgcgatgaaacgcagcgttgcgaaagctgcc
gttgagttgattcagccaggtcatcgggtgatcctcgattccgggaccaccacttttgag
attgctcgtctgatgcgcaagtacactgacgtaattgcgatgaccaacggtatgaacgtg
gctaatgcgttgctggaagcggaaggcgttgagctgctgatgaccggcgggcatttgcgc
cgtcagtcgcaatctttttacggcgatcaggctgagcaatcgctgcaaaattaccacttc
gatatgctgtttcttggtgtagatgcgatcgatctggagcgcggcgtcagcacacataat
gaagatgaagcccgtttaagccgtcggatgtgcgaagttgcggaacggatcatcgtggtc
accgattccagtaaattcaatcgttccagtttacataagatcattgatactcaacgtatc
gacatgatcattgttgatgaaggcattcctgcggatagtctggaaggactgcgaaaggct
ggggttgaagtgattctggtcggggatcacgcgtcttcgctgtga
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