Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02754
Help
Entry
SPHFLASMR4Y_02754 CDS
T04949
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPHFLASMR4Y_02754 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_02754 (mutM)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPHFLASMR4Y_02754 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPHFLASMR4Y_02754 (mutM)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPHFLASMR4Y_02754 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ASK89491
UniProt:
A0A220W9K0
LinkDB
All DBs
Position
2829589..2830401
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTVAGLRPVLEGQRLSRVEPRRADLRWPIPVDLRQRMTGAVVTSLGRRAKYG
LIETDRGDIMIFHLGMSGRWRIDPEEIEKHDHLLMETDSGHRLTLNDPRRFGSLDIVRRE
ELASYRPFTMMGPEPLSEEFTGAHLKAATKDRKAPIKQLLLDQRTVAGLGNIYVCEALHM
AGISPARKGGAISKPRYDRLVAAIKQVLIAAIAAGGSSLRDFVQPDGELGYFAKDWRVYG
REGDACECGAVVRRRVDSGRSTFYCPQCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttacctgaagtggagacgaccgtcgcaggtttgcggccggtgctcgaaggt
cagcgcctgtccagggtcgagccgcgccgcgccgatctgcgctggccgatcccggttgat
ttgcgacaaaggatgaccggtgccgtggtgacttcgctcggccgacgggcgaaatatggt
ctgatcgaaacggatcgcggtgacataatgatctttcatctcggcatgtcgggtcgctgg
cggatcgatccggaagaaattgagaaacatgatcatctgttgatggaaaccgattcgggt
caccggttgacgctcaatgatccgcgccgattcgggtcactggatattgtgcgtagagag
gaacttgccagttataggcctttcacaatgatgggaccggaaccgttgagcgaagaattt
accggtgcgcatctgaaggctgcaaccaaggatcgcaaagcgccgatcaagcaactcttg
ctggaccagcggacggtcgcgggactcgggaatatttatgtctgtgaagccctgcacatg
gcaggcatctctccggcccgaaaagggggcgcgatatcgaaaccgcgctatgatcggctg
gttgccgcgataaagcaggtcctgatcgccgccattgcggccgggggttcttctctgcgc
gatttcgtgcaaccggacggagaactgggatattttgccaaggactggcgggtctatggc
cgcgaaggcgacgcctgtgaatgcggtgctgtggtgcggcgacgagtcgacagcgggcgg
tcgaccttttattgtccgcaatgtcagaaataa
DBGET
integrated database retrieval system
