Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03077
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Entry
SPHFLASMR4Y_03077 CDS
T04949
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPHFLASMR4Y_03077 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_03077 (uvrA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPHFLASMR4Y_03077 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPHFLASMR4Y_03077 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
AAA_25
RsgA_GTPase
AAA_23
AAA_21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASK89810
UniProt:
A0A220WAC5
LinkDB
All DBs
Position
complement(3136878..3139916)
Genome browser
AA seq
1012 aa
AA seq
DB search
MSLTHIKVKGAREHNLKGVDIELPREKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLEMMQKPDVEHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARAGVP
YSPATGLPITAQTVSQMVDRVMTLPEKTRFFLLAPVVRGRKGEYRKELLEWQKAGFTRVR
VDGEFYDIEETPKLDKKYKHDIEVVVDRLVVREGMEQRLADSFETALRLADGLAFVDLAD
GTVEEALANHASTGSPRTAGNDDSTPKKSVRPEPVEPQATAGQRQDVAEASANFKPEPAS
KKMKGTGLPPNRIVFSERFACPVSGFTIEEIAPRLFSFNAPQGACPSCDGLGEKLHFDTQ
LIVPNPALSIKQGAVVPWAKSNPPSPYYMQVLGSLARHFEFDLETPWNELSAHHQDVILN
GTQGLPVTLRFQDGRKSYEVKKPFEGVVGNLNRRMLQTESAWMQEELAKFQAAAPCETCH
GARLKPEALAVKIAGEDISISTRRSVGDALAFFEGLGAQLDKTQSQIAEPILKEIIERLG
FLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDRLL
TTLKRLRDLGNTVIVVEHDEDAIRTADWVVDMGPGAGVHGGEVVAEGTLKQILKSKKSLT
AAYLNGTREIEVPAKRRKGNGKKLTVHGATANNLQNVTASIPLGTFTCITGLSGSGKSSL
TIDTLYASAARTLNGARVIAGAHDKITGLEYCDKVIDIDQSPIGRTPRSNPATYTGAFTN
IRDWFAGLPEAQARGYKPGRFSFNVKGGRCEVCRGDGLIKIEMHFLPDVYVTCEECGGKR
YNRETLEVKFKGKSIADILDMTVEDAVSFFKAVPPIRDKMAMLYEVGLGYVKVGQQATTL
SGGEAQRVKLAKELSKRSTGQTLYILDEPTTGLHFEDVRKLLQVLHQLVEQGNSVVVIEH
NLDVIKTADHIIDLGPEGGVRGGEIVAQGTPEEVARVKGSYTGGYLKDMLAK
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgacccacatcaaagtaaaaggcgcccgcgagcataatctcaagggcgtggat
atcgagcttccgcgcgagaagctgatcgtgatcaccggcctgtccggttccggcaagtcg
agcctcgcgtttgatacgatctatgccgaggggcagcggcgctatgtcgagagcctgtcg
gcctatgcacggcagtttctcgagatgatgcagaagcccgatgtcgagcatatcgagggc
ctgtctcccgcgatctcgatcgaacagaagaccaccagccgcaatccgcgctcgaccgtc
gcgacggtgaccgagatttacgactatatgcggctgctctgggcgcgcgccggcgtgcct
tattcccccgcaaccggcctgccgatcaccgcgcagaccgtctcgcagatggtcgaccgg
gtaatgaccctgcccgagaagacccgattcttcctgctcgcgcccgtggtgcgcgggcgc
aagggcgaatatcgcaaggaattgctcgaatggcagaaggccggtttcacccgcgtccgg
gtcgatggcgaattttacgacatcgaggaaacgccgaagctcgacaagaaatacaagcat
gacatcgaggtggtcgtcgaccgtctcgtggtgcgcgagggcatggagcaaaggctcgcc
gacagcttcgagacggcactgcggctggcggatgggctggcctttgtcgatctggctgac
gggacggtagaggaagcccttgccaatcatgcttcgacaggctcaccacgaacggcgggt
aatgacgatagtacgccaaagaaatccgttcgtcctgagcctgtcgagccgcaggcgacc
gcaggtcaacgacaggatgtcgcagaagccagcgcgaatttcaaacctgaaccggcgagc
aagaagatgaaaggcaccggcctcccgccgaaccggatcgtcttctccgaacgcttcgcc
tgccccgtcagcggtttcaccatagaggaaatcgcgccccgcctgttctcgttcaacgcc
ccccagggcgcctgcccgtcctgcgacggtctcggcgagaagctccatttcgacacccag
ttgatcgtccccaatccggcgctgagcatcaagcagggcgcggtggtaccctgggccaag
tccaacccgcccagcccctactatatgcaggtcctgggcagtctcgcgcgccatttcgaa
tttgatctcgaaacaccatggaacgagctgagcgcacatcatcaggatgtcattctcaac
ggcacacaaggccttcccgtcaccctgcgcttccaggacgggcgcaaatcctacgaagtg
aaaaagccgttcgaaggcgtcgtcggaaatctcaaccgccggatgctgcagaccgagagc
gcctggatgcaggaggaactggccaaattccaggccgctgctccatgcgagacctgtcac
ggcgcgcggctgaagccggaagcgctggcggtcaagattgccggcgaggatatttcgatt
tcgacccggcgcagcgtcggcgacgcgctggcatttttcgaaggtctcggcgcacagctc
gacaagacccagagccagatcgccgaaccgatcctcaaggaaattatcgagcgactcggc
ttcctcaacaatgtcggtctcgactatctcaatctcgaccggaccagcggcacgctctcc
ggcggtgaaagccagcgtatccggctcgccagccagatcggatcaggcctgagcggcgtg
ctctatgtgctcgacgagccgagcatcggcctgcaccagcgcgacaatgaccggctgctg
accacgctcaagcgtctgcgcgatctcggcaatacggtgatcgtggtcgaacatgacgaa
gatgccatccgcaccgccgactgggtcgtcgacatggggccgggcgccggtgtccatggc
ggcgaggtcgtcgccgaaggcacgctcaagcagatattgaaatcgaaaaaatcgctgacc
gccgcctatctcaacggcacccgcgaaatcgaggtgccggccaagcgccgcaagggcaac
ggcaagaagctcaccgtccacggcgccaccgccaataatctacagaatgttaccgcatcg
atcccgctcgggacgtttacctgcatcaccggcctgtccggctcgggcaaaagctcgctg
accatcgacacgctctacgcttcggccgcccggacgcttaatggcgcgcgggtgattgcc
ggcgcgcatgacaagatcaccggtctcgaatattgcgacaaggtcatcgacatcgaccag
tcgccgattggccgcaccccgcgatccaacccggcgacctataccggcgccttcaccaat
atccgcgactggttcgccggcctgccggaagcgcaggcgcgcggttacaagcccggccgg
ttcagcttcaacgtcaagggcggccgctgcgaagtgtgccgcggcgacgggctgatcaag
atcgagatgcacttcctgcccgatgtctatgtcacctgcgaggaatgcggcggcaaacgc
tataatcgcgagacgctggaagtgaagttcaaaggcaagtcaatcgccgatattctcgac
atgacggtcgaggatgcagtcagcttcttcaaggcagtcccgccgatccgcgacaagatg
gcaatgctctacgaagtcggcctcggctatgtgaaggtcggccagcaggcaaccacgctg
tcgggcggcgaggcccagcgggtcaagctggccaaggaattgtccaaacggtcaaccgga
cagacgctctatattctcgacgaacccaccaccgggctgcatttcgaggatgtccgcaag
ctgctgcaagtgctccatcaactggtcgagcagggcaatagcgtggtcgtgatcgaacat
aatctcgacgtcatcaagaccgccgaccatatcatcgaccttggccccgaaggcggcgtg
cgcggcggcgaaattgtcgcccagggcacaccggaagaggtcgccagggtcaaaggcagc
tacaccggaggctatctgaaggacatgctggcgaagtga
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