KEGG   Scleropages formosus (Asian bonytongue): 108924244
Entry
108924244         CDS       T04919                                 
Name
(RefSeq) collagen alpha-2(V) chain-like
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108924244
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sfm00536]
    108924244
Glycosaminoglycan binding proteins [BR:sfm00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108924244
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 108924244
NCBI-ProteinID: XP_018590994
LinkDB
Position
21:complement(6896539..6941349)
AA seq 1493 aa
MKTSVHYRSFLFFLVSVAQVSFIRCQGQIIGDDLSCSEDGLTYSNRDIWKPEPCRICVCD
SGAILCDEIMCDEVTYCEKMTIPEGECCPICQDDQVPALVSKGQKGEPGDVPFVTGITGR
PGPMGPPGAPGGRGERGNQGKPGPRGPPGYDGEPGVPGQPGEPGPPGHPTHPEGQLASHM
EVGFDEKSRALGNIGMVPGARGEAGARGPPGPTGQPGPSGMQGPPGEAGDPGQMGSAGPR
GPEGPQGKPGEDGESGKAGNAGELGFPGSPGARGFPGMPGPPGLKGHKGHQGPIGLKGEH
GGVGSKGAPGPTGPLGAPGGQGPRGMPGERGRIGPGGTPGRHGPPGNIGKPGPLGPLGLS
GPPGFPGAPGSKGEPGPTGVRGPEGPQGQRGETGHQGRPGPTGVRGPVGTDAGPGTKGPV
GTVGPQGPAGLLGPPGPPGPQGSTGQPGIKGQLGDVGSPGFKGEAGPKGEPGPPGAQGPI
GPQGEEGKRGARGDTGSLGPLGSVGERGAPGNRGFPGADGLPGSKGAQGDRGIPGTSGPK
GATGDPGRTGEPGLPGARGLTGNPGIQGAEGKPGPLGEPGEDGRPGPGGSLGTRGPPGPM
GLPGPKGFNGDAGKAGEQGSPGPQGQRGAPGKDGEEGPAGSAGPPGPAGERGEQGPPGVN
GFQGLPGPPGPPGEPGKPGDQGIPGEGGAVGQIGPRGERGTPGERGELGSLGLPGAKGIP
GAPGPDGPKGSPGPTGILGDPGPPGLQGMPGERGISGPPGPKGERGSGGEKGAEGTAGND
GARGLPGPVGPPGPHGPSGEKGEAGPQGPPGPHGARAGPGSRGEPGPTGPVGFAGPPGPD
GQPGVKGETGEPGQKGDAGSPGPQGLAGAQGPPGPTGVAGLKGGRGTQGAPGPTGFPGSP
GRVGPPGPVGPLGQPGPIGLPGKEGPRGLRGDHGPPGRQGERGAAGPPGSPGDKGDGGED
GPTGPDGPPGPAGTTGQRGIVGLPGQRGERGMAGLPGPPGPPGKTGAPGTQGDKGPPGPL
GLPGANGPRGDPGPDGSAGGDGPPGKEGVIGARGDRGDPGPEGLAGAPGAPGSPGPVGAL
GAPGKRGDPGSRGPLGPPGSAGKRGLIGPQGPRGDKGDLGEHGERGQKGHRGFTGLQGLP
GSPGTPGEQGAPGIFGPQGQRGPPGPVGPPGREGYIGTPGPMGPPGSRGFVGDIGPEGPP
GDPGPPGPPGSPGPPTAAMEDIFGEQTDYDDSPPPPPEFSEDEALPNSNTSASFPADPGV
QATLKALSSQIESMRSPDGSKNHPARTCEDLKQCYPLKKSGEYWIDPNQGSAEDAIKVFC
NMDTGETCISANPTSIPRKTWWSSSSPVGNKPIWFGLNMNGGTQFTYGNKEQAPNSVTVQ
MTFVRLLSKEASQTITFHCKNSVAYKDENAGNLKKAIILKAANDLELKAEGNSRFRYTVT
EDGCSQATGTWGKTVFEYRTQKTARLPIVDIAPMDIGQADQEFGMDIGPVCFV
NT seq 4482 nt   +upstreamnt  +downstreamnt
atgaagacctctgtgcattacaggagttttctattttttcttgtttctgtggctcaggtt
tcattcataagatgccagggtcaaatcataggagatgacctgagctgttccgaggatgga
ctaacctacagtaatagagacatatggaagccggagccgtgtcgaatctgtgtgtgtgac
agtggtgctatcctctgtgatgaaatcatgtgtgatgaggtgacatactgcgagaagatg
actatccctgagggggaatgctgccccatctgtcaagatgaccaggtgccagccctagtg
agcaagggccagaaaggggaacctggggatgttccatttgttacgggtattacagggcgg
ccagggccaatggggcctccgggtgcaccaggtggtagaggagaacgtggaaaccaagga
aaaccaggtccaagaggccctcctgggtacgatggagagccaggtgtcccaggacaacca
ggggaaccaggcccgcctggacaccctacgcaccctgaagggcaactagcttcacacatg
gaggtcggatttgatgagaaatcaagagccttgggcaacattggaatggtgccaggagca
cggggagaagcaggagcaagaggccctccagggccaactggtcaaccaggaccatcggga
atgcaagggccccctggtgaggctggtgatccaggacaaatggggtctgctggtccaaga
gggcctgagggtcctcaaggcaaaccaggggaagatggagaatctggaaaggcaggaaat
gcaggagaactgggattccccggatcgccgggagcaagaggatttccaggtatgccaggt
ccaccaggtttaaaaggccataagggtcaccaaggaccaattggcctaaaaggtgaacat
ggaggtgttggatcaaagggtgcaccaggccctactggacccctgggtgcacctggtggt
cagggaccaagaggaatgccaggggagagaggcagaataggcccaggtggaacaccggga
aggcatggtccacctggaaacatcgggaagccgggtccactgggccctttgggtttaagt
ggtcccccaggatttccaggagccccaggcagcaagggtgagcctggacccacaggagtc
cggggacctgagggccctcaaggccaaaggggagagacaggacatcaaggcagacccggt
ccaactggcgttcgaggtccagttgggacagatgcaggccctggaaccaagggtcctgtt
ggtacagtgggtcctcagggtcctgctggcctacttggtccacctggcccaccgggacct
cagggaagcactgggcagcctgggatcaaaggtcaactgggtgatgtcggatcccctggt
ttcaaaggagaagctggtcctaaaggtgaaccaggtccacctggggctcaagggccaatc
ggaccccaaggagaagaagggaagaggggggcacgtggagatactggttctctgggccct
ctgggttctgttggtgaaagaggtgctcccgggaacagaggattccctggtgcagatgga
ttaccaggttctaagggtgcgcaaggtgatcgtggaattcccggaacatctggacctaaa
ggtgccacaggtgaccctggacgcactggcgaaccaggtctccctggtgcaaggggtctg
accggcaatccaggcatccagggtgcagagggaaagccaggaccactgggagaaccaggg
gaggatggacgaccaggacctggaggatcacttgggaccagaggcccacctggaccaatg
ggtttacctggaccaaagggttttaatggagatgcaggcaaggcaggagagcaaggatct
ccaggacctcaagggcaaagaggtgctcctgggaaagatggagaagaaggccccgcaggg
tcagctgggccaccaggccctgctggtgaaagaggagaacaaggaccacctggtgttaat
ggtttccagggtttgccagggcctcctggcccacctggagagccaggaaaaccaggagat
cagggtattcctggagaaggcggagctgttggtcagataggtcccaggggagagcgaggt
accccaggtgagaggggagaacttggctctcttggtctgccaggggccaagggtattcca
ggagcacctggaccagatgggccaaagggtagccctgggccaactggtattcttggtgac
cctggacccccaggtctccaaggcatgccaggtgagaggggtatttctggtcctcctggc
cctaaaggtgaaaggggttctggtggcgagaaaggagcagaaggtactgctggaaatgat
ggtgcaagaggtcttcctggtccagttggaccaccaggaccacatggacctagtggagag
aagggagaagctggcccccaaggcccacctggacctcatggagcgagagcaggtccgggg
tcacgtggagaacctggtcctactggtcctgttggatttgctgggcctcctggtcctgac
ggtcaacctggtgtcaaaggtgaaacaggagaacctggtcagaagggtgatgctgggtct
ccaggtccccaggggttggctggtgctcaagggcctccagggcccaccggtgttgctggc
ctaaaggggggtagaggaacacaaggagcaccgggtccaactggttttcctggatcacca
ggaagagttggccctcctggtccagttggtccacttggacaaccaggacccataggtctt
cctgggaaggagggtccacggggtcttcgtggtgaccatggaccccctggacgtcaagga
gagcgaggtgcagctggtccaccaggtagcccaggagacaaaggagatggaggagaagat
ggacccacaggccctgatggtccaccaggtccagctggaactacgggccaaagaggaatt
gttggacttcctggacagaggggagaaagggggatggcaggtcttccaggtcctcctggt
cctccaggaaaaacaggggcccctggaactcagggagacaaaggacccccaggtccactt
ggtttaccaggtgcaaatggaccccgaggtgaccctggtccagatggatctgcaggaggt
gatggcccaccaggcaaggagggagtcataggagccaggggagacagaggggatccaggc
ccagagggacttgctggtgctccaggggctcctggctctcctggcccagttggtgctctt
ggtgctcctggaaaaagaggagacccaggttcaagaggaccccttgggcccccgggttca
gcaggaaagcggggattaataggaccccaaggaccaagaggggataaaggtgaccttgga
gaacatggggagcgaggacagaaaggtcacaggggcttcactggattacaaggtttacct
ggctcacctggaacacctggtgagcaaggtgctccaggaatttttggacctcaagggcaa
agagggcctcctggaccagttggacctccaggaagagaagggtacattggaaccccaggg
ccaatgggaccaccgggatcacgtggatttgttggtgacattggaccagaaggaccacct
ggagatcctggtcccccagggcctcctgggtccccaggtcctccgacagctgcaatggaa
gatatatttggagaacaaactgactatgatgacagccccccacctccaccggaatttagt
gaagatgaagctcttccaaacagcaacacatcagcttccttcccagccgaccctggagtc
caggctactctgaaggccctcagcagccaaatagagagcatgcgtagtcccgatggcagc
aaaaatcaccctgcccggacctgtgaagacttaaaacagtgctacccattaaagaagagc
ggggaatattggattgaccccaaccaagggagtgcagaggatgccatcaaagtgttctgt
aacatggacactggtgagacctgcatctcagcaaacccaaccagcataccacgcaaaaca
tggtggagctcctccagtcctgttggcaataagcctatttggtttggattgaatatgaat
ggtggcacacagtttacctatggaaacaaagaacaagcaccgaactccgtcactgtccaa
atgacatttgttcgcctgctgtcaaaagaggcatctcagacaatcactttccactgcaag
aacagtgtggcatacaaggatgagaatgctggaaatttgaagaaagccatcatcctcaag
gcggccaacgaccttgagctcaaagcagagggaaacagtcggttccgatacaccgtcacg
gaggatggctgctcgcaagccactggcacctgggggaagactgtgtttgagtacaggaca
cagaaaacggcaaggcttcccattgtggacatagccccaatggacattggccaggcggat
caggagtttggaatggacattggacctgtgtgttttgtgtga

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