Scleropages formosus (Asian bonytongue): 108933760
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Entry
108933760 CDS
T04919
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04120
Ubiquitin mediated proteolysis
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108933760
04120 Ubiquitin mediated proteolysis
108933760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108933760
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108933760
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
U-box type E3
108933760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
108933760
NCBI-ProteinID:
XP_018606561
LinkDB
All DBs
Position
16:complement(15810020..15831517)
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AA seq
1172 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLSTPLTSPQRETPPGPLQASAPGLGLNVHAMT
SATSPIGATGVAFRSQSSEGVSSLSSSPSNSLDTQSQTLSRSQSMDIDTVACEKSMSLVD
VDSGIENMEVEESDRREKRSLSDKDSSPSPDVTEEQALQLVCKILRVSWKERSRDVIFLP
SLATEFHQSPRQVFSDIKDLIGQILMEVLMMSSQCRENNPFASLTATSLPIVAARSPDRH
LSLVPPSGQACNPMLGPVGSFGSSSPCSLGNSGGGVASDSTSDRFTIEACKETEMLNYLI
ERFDSVGMEERKAPKVCSQPLVSQLLSNIRSQCISHAVLVLQGALTQPRSLLQHSLLVPY
MLCRNLPYGFIQELVRMTHQEDEVFKQIFIPILQGLAQAVKECSFNSDSFKYPLMALTEL
CEIKYGKTHPVCNLMMSMPLWCPEPLSTATGREVQRLSYLGSFFSLSVFAEDDTKVGDKY
FSGPTITLENTRVVSQSLQHYLESARGDLFKILHSVLLNGETREAALNYMAAVVNRNVRK
AQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPNYIFHPRCRLSIPVEETRLKASM
EELKTWLADFHDDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRELNRTVE
ELKNSENQWKDSPLAPRHREMLKRCKAQLKKLVRCKACADVGLLDENLLRRCLQFYSMVI
QLVLRIVDPAYPDINLPLNPEVPRGFAALPEFYVEDVAEFILFIVQYFPQVLYEPCTQDV
VTFLVVFICSENYIRNPYLIAKLVEVLFVTNPAVQPRTHRFSEMMENHPLAVKQLVPALM
KFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIGHHGTFLKEFNSGKQFVRYINMLI
NDTTFLLDESLESLKRIHEVQEEMKSKDQWDQMSREQQQSRQSQLAQDERVSRSYLALAT
ETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKL
LDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLSEKV
EEIVARNSQSEIDYSDAPDEFKDPLMDTLMSDPVKLPSGNIMDRAVILRHLLNSPTDPFN
RQPLTESMLESVPALKDRIQAWMKEKQGGRNS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagtgccgatgagatccggaggaggcgcctagcccgactggcaggcgga
cagacatcacaacccaccacacccctcagcacccccttgacatcaccacagagggagact
ccccctggtcccctgcaggcctcggcacctggcctggggctgaacgtccacgccatgacc
tcggccacatcccccattggagccacaggagtggccttccgtagccagagcagcgagggt
gtcagctccttgtccagctcgccatccaacagcttggacacacaatcgcagactctgtcc
cgctcccagagcatggacattgacacagtagcctgtgagaagagcatgtcgctggtggat
gtggactcaggcatagagaacatggaagtggaggagagcgatcgcagagagaagaggagc
ctctctgacaaggactcatcccccagccctgatgtgaccgaggagcaggcactgcagctt
gtctgtaagattctgcgcgtgtcctggaaggagcgcagccgtgatgtaatcttccttccc
tcccttgccacagagttccaccaaagcccaaggcaggtgttttctgatataaaggaccta
attgggcagattctgatggaagttctcatgatgtcctcccagtgtcgggaaaacaacccc
tttgccagtttgacagccacgtccttgcccatcgtcgcagccaggtccccagatcggcat
ctgtccttggtccccccctcaggccaggcgtgtaatcccatgctcggccctgtcggctcc
tttgggtctagttcgccttgcagtctgggcaactcaggaggtggtgtggcctctgactca
accagtgaccgcttcaccatcgaagcctgtaaggagacagagatgctgaactacctcatt
gaacgctttgacagtgtgggcatggaggagaggaaagctcctaaggtgtgcagccagcca
cttgtcagccagctgcttagcaacattcgttctcagtgcatctcccacgctgtgctggta
ctgcagggtgccctcactcagccgaggtctctgctgcagcattctcttctggttccctac
atgctgtgccgaaatcttccatatggttttatccaagagctggtccgtatgactcatcag
gaggatgaggtgttcaagcagattttcattcctatcctccagggactggcccaggctgtg
aaggagtgctccttcaatagtgacagttttaaatatcccttgatggctttaacggagctg
tgtgaaatcaagtatgggaaaacccatccagtttgcaatctgatgatgtccatgcccctg
tggtgcccggagccccttagtactgccactggcagagaggtgcagagactgtcctacctg
gggtcctttttcagcctgtctgtcttcgctgaggatgataccaaagtgggagacaagtac
ttctcaggacctacgatcaccttggagaacacacgagtggttagccagtctctacagcac
tacctggagtcagcacggggggatctctttaagatccttcacagtgttttacttaatgga
gagactcgagaagcagccctcaactacatggcggcagtggtcaatcgtaatgtcagaaaa
gctcagatgcagacagatgacaagcttgtgtccacagatggcttcatgttgaacttcttg
tgggtgctacagcaactgagcatgaagattaagctggaaacagtcgacccaaattacatc
ttccacccgcggtgtcgactgagcatacctgtagaggagacacgattgaaggcctccatg
gaagagctgaagacctggcttgctgactttcatgacgacccatcaaagttctccgagcca
aaattccctactgagtgcttcttcctgacactgcacgcgcatcacttgtccatcctgcct
tgctgtcggcgctacattcgccgactgcgagcaatccgagagttgaacagaactgtggag
gaactgaagaacagtgagaatcagtggaaggattctccacttgcccccagacacagggaa
atgctgaagaggtgcaaggcccagctcaagaaattggtgcgatgcaaggcctgtgcagat
gtgggtttactggatgagaacctcctccgtcgatgcctgcagttctacagtatggtcatc
cagctggtcctccgcattgttgaccctgcctacccagacatcaacctgccactgaaccca
gaagtcccccgtggcttcgcagcactgccagagttctacgttgaggatgtggctgagttc
atactctttattgtgcagtacttcccgcaagttctctacgaaccttgcacccaagacgtg
gtgacttttctggtggtattcatctgcagcgaaaattatatccgcaatccctacctgatt
gccaagttggtggaggtgctgtttgtcaccaaccctgctgtgcagccccgcacccatcgc
ttctccgagatgatggagaaccaccccctggctgtgaagcagcttgttcctgccctcatg
aagttctacactgatgtggagcacacaggtgccaccagcgagttctatgacaaattcacc
attcgctaccacatcagcacaatcttcaagagtctgtggcagaatataggacaccatgga
accttcctgaaagagttcaactcagggaagcagtttgtgcgctacatcaacatgctgatc
aatgacaccactttcctactggatgaaagcctggagtctctcaagcgcatccatgaggtg
caggaagaaatgaagagcaaggatcagtgggatcagatgtccagggagcagcagcagagc
aggcagtcgcagcttgcacaggacgagcgggtatctcgctcctacttggcactggccact
gagaccgtggacatgtttcacctgttgaccaagcaggtccagaagccgttcctacggcct
gagctgggtccccgattggctgctatgctgaactttaatctccagcagctgtgtggtcct
aagtgcagggatctgaaagtggagaacccagagaagtatggctttgagcccaagaagctg
ctggatcagctgactgatatttacttacagctggactgtgcccgatttgccaaggctatt
gctgatgaccagcggtcatacagccgggaactctttgaagaggtcatctcgaagatgagg
aaagctggcatcaaatcaacgatcgcaatagagaagttcaagttgctttcagagaaggtg
gaagaaattgtagcccgaaattcccagtcagaaattgactacagtgatgcacctgatgag
tttaaagatccgctgatggacactctcatgagtgaccctgtgaagctgccctcagggaac
atcatggaccgagccgtgatcctgagacacttacttaactccccaacagaccccttcaat
aggcaaccgctgactgagagcatgctggagtcagtgccagcactgaaggatcgtatccag
gcgtggatgaaagagaagcaaggaggacgcaactcctag
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integrated database retrieval system
