Scleropages formosus (Asian bonytongue): 108935335
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Entry
108935335 CDS
T04919
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04136
Autophagy - other
sfm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108935335 (atg4c)
04136 Autophagy - other
108935335 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108935335 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108935335 (atg4c)
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108935335 (atg4c)
Peptidases and inhibitors [BR:
sfm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108935335 (atg4c)
Membrane trafficking [BR:
sfm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108935335 (atg4c)
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108935335 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
108935335
NCBI-ProteinID:
XP_018609383
LinkDB
All DBs
Position
9:15515275..15525088
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AA seq
465 aa
AA seq
DB search
MDNKEADEGDKLKSRLMSAWHNVRYSWVLKSKTHFSRNSPVFLLGKCYHFKSDDTEDPLA
SCSAVETESNHVSGNVEAFRRDFASRIWLTYREDFPVLQGSSFTSDCGWGCTLRAGQMML
AQALILHFLGRDWTWAEALRLQTLDTETWTSNAARKLVASLESPVPGERNSHPGARLATW
PRGKPGGSIVPPGEAHHRRVVSWFGDIPSAQLGVHKLVEHGRSSGKQAGDWYGPAVVAHI
LRKAVEEATDPELRGITVYVAQDCTVYSGDVIDSHGEQPLSSTTAGHRDRRAVVILIPIR
LGGEKTNAEYFDFVKGILSLEYCLGIVGGKPKQAYYFVGFQDDSLIYMDPHYCQSFVDVS
ISDFPLETFHCPSPKKMPFNKMDPSCTIGFYSQSVKDYEQISEELSKVLRPSAKEKYPAF
TFMKGHGRDYDLSAPPAQERKEWPFLGESRRVGATAGDFVLLSMA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacaataaggaggcagatgagggggataaattaaagagcagattaatgtctgcatgg
cacaatgtgagatacagctgggttctcaaatcaaagactcatttcagccgaaattctcct
gtcttccttctgggaaaatgctaccactttaagtctgacgacaccgaggacccactagca
agctgcagtgctgtggaaacagaaagcaatcatgtttccggaaatgtggaggcctttcgc
agggacttcgcatcccgtatatggctaacgtaccgagaagatttcccagtcctgcaaggc
tcctccttcacctcagactgtggttggggttgtaccctgcgggctggccaaatgatgttg
gcccaggccctaatccttcacttcctgggccgagactggacctgggcagaggccttgagg
cttcagactttggacacagaaacatggacgagtaatgctgccaggaagctggtagcatct
ctggagtccccagtcccaggagaaaggaacagccacccaggtgcccgacttgccacgtgg
ccacggggaaagccaggagggtccattgttcctcctggggaagcgcaccatcggcgagtg
gtctcttggtttggagacatcccctctgcccagctgggtgtgcacaagctggtggagcat
gggcgatcatcagggaagcaggccggggactggtatggtcctgcagtagtcgcccacatc
ctgagaaaagctgttgaggaggcaacagaccctgaattgcgaggcataaccgtttacgtt
gctcaagactgcacagtttacagcggtgatgtcattgatagccatggggaacagccattg
agctccaccaccgcaggccacagagaccgccgagctgttgtaattcttatccccatcagg
ctgggtggggagaaaaccaatgctgagtattttgacttcgtcaagggcattttaagtctc
gaatactgcctgggtatcgtaggggggaagcccaaacaggcctactactttgtcggattt
caagatgacagcttgatttacatggaccctcattactgtcagtcttttgtggatgtcagc
ataagcgatttcccactagagactttccattgcccttcaccaaagaagatgccttttaac
aaaatggatccaagctgcactattgggttttactctcaaagtgtgaaggactatgagcag
attagtgaagaactgtcaaaggtgttgcgtccgtcagcaaaagagaaataccctgctttc
accttcatgaaaggtcacggccgagactacgacctttctgctcctccagcccaggagcgc
aaagagtggccctttctgggggagtccagaagagttggagctaccgcgggagactttgtg
ttgctgagcatggcctag
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