Scleropages formosus (Asian bonytongue): 108936270
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Entry
108936270 CDS
T04919
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
sfm04140
Autophagy - animal
sfm04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108936270
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108936270
09143 Cell growth and death
04217 Necroptosis
108936270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108936270
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108936270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108936270
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
108936270
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108936270
MMR (mismatch excision repair)
Other MMR factors
108936270
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108936270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_box_5
NOA36
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
108936270
NCBI-ProteinID:
XP_018611071
UniProt:
A0A8C9UZP7
LinkDB
All DBs
Position
4:24738876..24742867
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AA seq
215 aa
AA seq
DB search
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSAKEKGKFE
DLAKLDKARYEREMKNYIPPKGEKKKKRFKDPNAPKRPPSAFFIFCAEFRPKVKEETPGM
SIGDVAKKLGEMWNSTSSEDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDGGPKKAPAKPE
KAKKKKKDDDDDDDDDDDDDDDDEEDEDDEEDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggatcctactaagcccaggggcaagatgtcttcctatgcctactttgtgcaa
acttgtcgggaagagcataagaagaaacacccagaagcctctgtcaacttctcggaattc
tccaagaagtgttcggaaagatggaagactatgtctgccaaagaaaagggcaagtttgaa
gatctggctaagctggacaaggcacgttatgagagggagatgaagaactacatcccacca
aagggtgagaagaagaagaagaggtttaaggatccaaatgctcccaaaagacccccgtct
gctttcttcatattctgcgctgaattccgcccgaaagtcaaggaagagacccctggcatg
tccatcggtgatgtggccaagaaacttggtgagatgtggaacagcacctcatcggaggac
aagcagccgtatgagaagaaggctgccaagctgaaggagaagtatgagaaggacattgct
gcctaccgtgctaagggcaagcctgatggtgggcccaagaaggcacctgccaagccggaa
aaggccaagaagaagaagaaggacgacgatgatgacgacgatgatgatgatgacgacgat
gacgacgatgaggaggacgaggacgatgaggaagatgacgatgaataa
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