Shigella flexneri 2003036: SFy_4113
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Entry
SFy_4113 CDS
T03267
Name
(GenBank) Glycine dehydrogenase [decarboxylating]
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sfn
Shigella flexneri 2003036
Pathway
sfn00260
Glycine, serine and threonine metabolism
sfn00630
Glyoxylate and dicarboxylate metabolism
sfn00785
Lipoic acid metabolism
sfn01100
Metabolic pathways
sfn01110
Biosynthesis of secondary metabolites
sfn01200
Carbon metabolism
Module
sfn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SFy_4113
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SFy_4113
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SFy_4113
Enzymes [BR:
sfn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SFy_4113
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AIL37163
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All DBs
Position
complement(2981960..2984833)
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AA seq
957 aa
AA seq
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MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQIVPKDIQLATPPQVGA
PATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNMLENPGWYTAYTPYQPEVS
QGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAMAKRVSKLKNANRFFVASNVH
PQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQQVGTTGEIHDYTALISELKSRK
IVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEYKRSMPGR
IIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVYHGPVGLKRI
ANRIHRLTDILAAGLQQKGLKLRHAHYFDTLCVEVADKAGVLTRAEAAEINLRSDILNAV
GITLDETTTRENVMQLFSVLLGDNHGLEIDTLDKDVAHDSRSIQPAMLRDDEILTHPVFN
RYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWTEFAELHPFCPPE
QAEGYQQMIAQLADWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLI
PASAHGTNPASAHMAGMQVVVVACDKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVY
EETIREVCEVVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPG
MGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKK
ASQVAILNANYIASRLQDAFPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDY
GFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNA
PHIQSELVAEWAHPYSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacgttaagccagcttgaaaacagcggcgcttttattgaacgccatatcgga
ccggacgccgcgcaacagcaagaaatgctgaatgccgttggtgcacaatcgttaaacgcg
ctgaccggccagattgtgccgaaagatattcagcttgcgacaccaccgcaggttggcgca
ccggcgaccgaatacgccgcactggcagaactcaaggctattgccagtcgcaataaacgc
ttcacgtcttacatcggcatgggttacaccgccgtgcagctaccgccggttatcctgcgt
aacatgctggaaaatccgggctggtataccgcgtacactccgtatcagcctgaagtctcc
cagggccgccttgaagcactgctcaacttccagcaggtaacgctggatttgactggactg
gatatggcctctgcttctcttctggacgaggccaccgctgccgccgaagcaatggcgatg
gcgaaacgcgtcagcaaactgaaaaatgccaaccgcttcttcgtggcttccaatgtgcat
ccgcaaacgctggatgtggtccgtactcgtgctgaaacctttggttttgaagtgattgtc
gatgacgcgcaaaaagtgctcgaccatcaggacgtcttcggcgtgctgttacagcaggta
ggcactaccggtgaaattcacgactacactgcgcttattagcgaactgaaatcacgcaaa
attgtggtcagcgttgccgccgatattatggcgctggtgctgttaactgcgccgggtaaa
cagggcgcggatattgtttttggttcggcgcaacgcttcggcgtgccgatgggctacggt
ggcccacacgcggcattctttgcggcgaaagatgaatacaaacgctcaatgccgggccgt
attatcggtgtatcgaaagatgcagctggcaataccgcgctgcgcatggcgatgcagact
cgcgagcaacatattcgtcgtgagaaagcgaactccaacatttgtacttcccaggtactg
ctggcaaacatcgccagcctgtatgccgtttatcacggcccggttggcctgaaacgtatc
gctaaccgcattcaccgtctgaccgatattctggcggcgggcctgcaacaaaaaggtctg
aaactgcgccatgcgcactatttcgacaccttgtgtgtggaagtggccgacaaagcgggc
gtactgacgcgtgccgaagcggctgaaatcaacctgcgtagcgatatcctgaacgccgtg
gggatcacccttgatgaaaccaccacgcgtgaaaacgtaatgcagcttttcagtgtgctg
ctgggcgataaccacgggctggagatcgacacgctggacaaagacgtggctcacgacagc
cgctctatccagcctgcgatgctgcgcgacgacgaaatcctcacccatccggtgtttaat
cgctatcacagcgaaaccgaaatgatgcgctatatgcactcgctggagcgtaaagatctg
gcgctgaatcaggcgatgatcccgctgggttcctgcaccatgaaactgaacgccgccgcc
gagatgatcccaatcacttggacggaatttgccgaactgcacccgttttgcccgccggaa
caggctgaaggttatcagcagatgattgcgcagctggctgactggctggtgaaactgacc
ggttacgacgccgtttgtatgcagccgaactccggcgcacagggcgaatacgcgggcctg
ctggcgattcgtcattatcatgaaagccgcaacgaagggcatcgcgatatctgcctgatc
ccggcttctgcgcacggaactaaccccgcttctgcacatatggcaggaatgcaggtggtg
gttgtggcgtgtgataaaaacggcaacatcgatctgactgatctgcgcgcgaaagcggaa
caggcgggcgataacctctcctgtatcatggtgacttatccttctacccacggcgtgtat
gaagaaacgatccgtgaagtgtgtgaagtcgtgcatcagttcggcggtcaggtttacctt
gatggcgcgaacatgaacgcccaggttggcatcacctcgccgggctttattggcgcggac
gtttcgcacctcaacctgcataaaactttctgcattccgcacggcggtggtggtccgggt
atgggaccgatcggtgtgaaagcgcatctggcaccgtttgtaccgggtcatagcgtggtg
caaatcgaaggcatgttaacccgtcagggcgcagtttctgcggcaccgttcggtagcgcc
tctatcctgccaatcagctggatgtacatccgcatgatgggcgcagaagggctgaaaaaa
gcaagccaggtggcaatcctcaacgccaactatattgccagccgcctgcaggatgccttc
ccggtgctgtataccggtcgcgacggtcgcgtggcgcacgaatgtattctcgatattcgc
ccgctgaaagaagaaaccggcatcagcgagctggacattgccaagcgcctgatcgactac
ggtttccacgcgccgacgatgtcgttcccggtggcgggtacgctgatggttgaaccgact
gaatctgaaagcaaagtggaactggatcgctttatcgacgcgatgctggctatccgcgca
gaaattgaccaggtgaaagccggtgtctggccgctggaagataacccgctggtgaacgcg
ccgcacattcagagcgaactggtcgccgagtgggcgcatccgtacagccgtgaagttgcg
gtattcccggcaggcgtggcagacaaatactggccgacggtgaaacgtctggatgatgtt
tacggcgaccgtaacctgttctgctcctgcgtaccgattagcgaataccagtaa
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