Shewanella frigidimarina: Sfri_1262
Help
Entry
Sfri_1262 CDS
T00395
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_1262
Enzymes [BR:
sfr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
Sfri_1262
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Sfri_1262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ABI71115
UniProt:
Q085F0
LinkDB
All DBs
Position
1493272..1494153
Genome browser
AA seq
293 aa
AA seq
DB search
MISKENDAEYSLDNDDLYEQIGSEYIDENATADTELDDDLHPPHIDILFEDEHLVAIHKP
AGLLVHRSYLARRERFFAMQMTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEVARALCEQF
ADHSIKKHYLAIVRGNMHESGTLDYALKQEFDDLGDKHVDQNKAAQDAVTDYQPLLNTEI
PFSSGRYPTSRYGLVKLSPHTGRKHQLRRHMAHLRHPIVGDTTHGDGKQNKFFREHFTIN
RLWLIAKSLQFVHPVTQQSMHIETELEAEWLTVFNAFGWDDDQLSSMPSMLLS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaaagaaaacgatgctgaatactcattagataacgatgacttatatgaacaa
ataggctcggaatatattgatgagaacgctactgcagataccgaattagacgatgactta
caccctccccatatcgacattctatttgaagatgagcacctagttgctatccataagcct
gcaggtttattggttcatcgtagttatttagcccgtagggagcgattttttgcgatgcag
atgactcgtgatttagtgggctgccatgtttttccggtgcaccgcctagatagacctaca
tctggagtattactgtttgccaaatcgagtgaggtggctcgtgcattatgtgagcaattt
gctgatcatagtattaagaagcattatttagccattgttcgtggcaatatgcatgagtct
ggcacgctagattatgccctaaaacaggagtttgatgatttaggcgataaacatgtggac
cagaacaaggctgctcaagatgccgtgacggattatcaaccattattgaatacggaaata
ccgtttagttcaggtcgatacccaactagtcgttatggcttggtaaaattaagccctcat
actggccgcaagcaccaattacgtcgtcatatggcacatttacgtcatccaattgttggt
gatacaacccatggcgatggtaaacaaaataagttctttcgcgaacattttactattaac
cgtttgtggttgattgcaaaaagcttgcagtttgtacacccagtaactcagcaatcaatg
catattgaaactgagttagaagctgaatggttgactgtttttaacgcatttggctgggat
gatgatcaattatcatcaatgccaagtatgttattaagttaa
DBGET
integrated database retrieval system
