Shewanella frigidimarina: Sfri_1784
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Entry
Sfri_1784 CDS
T00395
Name
(GenBank) alpha amylase, catalytic region
Organism
sfr
Shewanella frigidimarina
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
hDGE_amylase
Alpha-amylase_C
Malt_amylase_C
DUF4995
Motif
Other DBs
NCBI-ProteinID:
ABI71634
UniProt:
Q083D1
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Position
complement(2095550..2097580)
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AA seq
676 aa
AA seq
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MFFNRTTPIKIIKERLMGTIIKPLASQLHRPSPTSKALVLASMLGLGLSACQPNTVEQTD
TAVKNDNENVSVTQINQTATTAKPVVYQVFTRLYGNTNTTNKAWGTIAENGVGKFSDFTD
VALRDIKSLGTTHVWYTGVPHHALVNDYTDDGISNDDPDVVKGRAGSPYAVKDYYNVNPD
LADNPANRLAEFEALIGRTHANGMQVIIDIVPNHVARNYHSISAPKGEPDFGANDDKTNT
YSRHNNFYYVVGEDFQVPQASDGYLPLGGETHPLIDAKFAESPAKWTGNGSRLAKPDAND
WYETVKINYGVKPDGSHDFPALPNDYANKTAAEHLAFWQAQAADDIPDSWRKFEHIAQYW
LAKGVDGFRYDMAEMVPVEFWSYLNSHIKHTNPNAFILAEVYNPDLYRDYIHLGKMDYLY
DKVDLYDTLKAIIQGKASTAAIATVQAKVSDIDQHMLHFLENHDEQRINTADFARNPFNA
LPAMVVSATLSRSPTLLYFGQEVGESGAENAGFGQPTRTSIFDYVGVPAHQRWMNNGKFD
GGQSTSKEKTLRAYYQTLLNLSHTATALSGEYRELDRLQRQNKVVGYDDSVFAFSRFSDT
QQLIIVSNFSQVQGKQFTLELPSSLIQAWHLLENAKLTDLLKNAQLNQQLILNKDGSASV
NIELSPLQSVILGVNK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaatagaaccactcccataaaaataataaaagagagactcatgggcaccatc
attaaaccgttagcaagccaacttcaccgaccttccccaacctctaaggcattggtacta
gccagtatgctgggattaggattaagcgcttgccaacccaataccgttgaacaaactgat
actgcggtaaaaaacgataacgaaaacgtatcagttactcaaataaaccaaactgctaca
acagccaaaccggtggtatatcaagtattcactcgcctgtatggcaacaccaataccacc
aataaagcttggggaactattgccgaaaatggcgtaggaaaattcagtgattttaccgat
gtggcattacgagatattaaatccttaggcaccactcacgtttggtataccggcgtaccg
catcatgcgttggtcaatgactatacggatgatggtattagtaatgatgatcctgatgtg
gtaaaaggccgcgcgggctcaccatatgcggtaaaagactactacaacgttaatccagat
ttagctgataatccggctaatcgcttggcagaattcgaagccttaatcggtcgtactcat
gccaatggcatgcaggtaattatcgacatagtgcctaatcatgtcgcgcgcaattatcat
tctatttcagcgccaaaaggcgagccagactttggtgctaacgacgataaaactaacacc
tatagtagacacaacaatttctattatgtggtcggtgaagactttcaagtcccacaagca
tcggatggttatctgccattaggcggcgaaacacatcccctcatcgacgcaaagtttgcc
gagtcaccggcaaaatggaccggcaacggctcacgtttagccaagcccgatgctaacgat
tggtacgaaaccgttaaaataaattacggagtcaaacccgatggcagccatgacttccct
gcactgcctaatgattatgcaaataaaaccgcagccgagcatttagccttttggcaagca
caagcggccgatgacattccagattcatggcgtaagtttgagcacatcgcccaatattgg
ctagccaaaggcgtagatggttttcgctacgacatggctgaaatggtaccagttgaattt
tggagttacctcaacagccacattaagcacaccaacccaaatgcgtttattctggctgag
gtgtataaccccgatttatatcgcgattatattcatttaggtaaaatggattacttatac
gacaaagtcgatttatatgacaccttaaaagccataattcaaggtaaggccagtacagca
gccattgccacagttcaagccaaagtcagcgacatcgatcagcatatgctgcatttttta
gaaaaccacgacgaacaacgcatcaacacagccgactttgctcgaaatccatttaatgca
ctgccagcgatggtggtgtctgcaacgttaagtcgctctcccaccttactgtattttggt
caagaagtaggtgaatcaggcgctgaaaatgcaggctttggacaaccgactcgcaccagt
atttttgattatgttggcgtgcctgctcatcaacgctggatgaacaacggcaagtttgat
ggcggacagtcaacatctaaggaaaagacattacgcgcttattatcaaacactgcttaac
ttaagccacacagcaacggcactaagcggtgaatatagggaactagatagactacagcgc
caaaataaggttgtgggttatgacgacagcgtctttgcttttagtcgttttagcgatact
cagcaattgattattgtcagtaactttagtcaagtccagggcaaacaatttacccttgag
ctaccaagctcactaatacaagcttggcatcttttggaaaatgcaaaactgacagattta
ctgaaaaacgctcaactcaatcagcaactcatattgaataaagatggcagtgctagtgtt
aacattgaactatcccctttacagtctgtgattcttggagtaaataaataa
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