Shewanella frigidimarina: Sfri_1891
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Entry
Sfri_1891 CDS
T00395
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_1891
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sfri_1891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
MarR
HTH_29
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
ABI71737
UniProt:
Q082S8
LinkDB
All DBs
Position
complement(2237719..2238573)
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AA seq
284 aa
AA seq
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MNTLEKVQKSLTQFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDTPESYTTKIFESSMASLDTARQSLDTSAINK
AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINCNEGDVVV
LISHTGRTKSLIEIARIARENGAAVIGITARNSPLSYECTLPVTMEVPEDTDMYLPMASR
LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRVNKDLTI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccttgaaaaggttcaaaaaagccttacccaatttagtaaatcggaacgtaaa
gttgccgaagtcatattagcctcaccgcaaacagctatacattcaagtattgccacatta
gcaaagatggctgatgttagtgaaccaacggttaaccgattttgtcgtcgattagacaca
aagggtttccctgattttaagttacatttggctcaaagtcttgctaacggcacaccttat
gttagtcgccacgttgaagaagatgacacgccagagtcatacacgacaaaaatcttcgaa
tcttcaatggcatcgctcgatactgcccgtcaaagtttagatacatcagcgataaataaa
gcggtcgatattctcactcaagctaagactatttcgttttttggccttggcgcatcagca
tctgtagcccacgatgcgcaaaacaagttcttccgttttaatgtaccagtgatatgtttc
gatgatgtgttaatgcagcgtatgagctgtattaactgtaatgaaggtgacgtggtcgta
ttgatttcgcatacaggtcgcactaaatcactgattgaaattgcccgtattgcgcgtgaa
aatggcgctgccgtgattggcattaccgcccgaaattcaccattgtcttatgagtgcact
ctgcctgtaacgatggaagtccctgaagacactgacatgtatttaccgatggcatcgcgc
ttagcacaattggttaccatagatgtgttggcaacaggctttaccttacgtagaggccct
cgtttccgtgataatttaaaacgtgtgaaggaagtgttgaaagaatctcgtgtgaacaag
gatttgaccatctaa
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