Shewanella frigidimarina: Sfri_2204
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Entry
Sfri_2204 CDS
T00395
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03030
DNA replication
sfr03430
Mismatch repair
sfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sfri_2204
03430 Mismatch repair
Sfri_2204
03440 Homologous recombination
Sfri_2204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfr03032
]
Sfri_2204
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_2204
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sfri_2204
DNA replication proteins [BR:
sfr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sfri_2204
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sfri_2204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABI72050
UniProt:
Q081L5
LinkDB
All DBs
Position
complement(2637837..2638565)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISSASRQVILDTETTGMNQAGGPIYVGHRIIEIGCVEVINRRLTGRTYHQYINPGQA
IDEEAIQVHGITNDRVANEPRFHQIAKDFIDFIDGAEIVAHNANFDVSFMDHEFSKLNPI
GPKTKDICSILDSLAIAKRLHPGQKNNLDALCRRYGIDNGRRTYHGALLDAEILADVYLI
MTGGQIKFNLSNEKAGQEGGGIKNIDPSAFNLKVVGASADEILLHEQRLDLIAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaacattatttctagtgcaagtcgtcaagtgatcctcgataccgaaactaccggtatg
aaccaagcgggtggacctatttatgtgggccatcgcattattgaaattggttgtgtcgaa
gtgattaatcgtcgcttaacaggccgaacgtatcaccaatatattaatcctggtcaagcg
attgatgaagaggcaattcaagttcacggtattaccaatgaccgtgtggccaacgaaccg
cgttttcatcaaatagccaaagattttatcgattttatcgatggtgctgaaattgtcgct
cataacgccaacttcgatgtgagctttatggaccatgagttttcaaaactcaatccaatt
gggcctaaaaccaaagacatttgcagtattctcgacagtttggccattgccaaacgtctg
catccaggccaaaaaaacaatctagatgcattgtgtcgacgttatggtatcgataatggc
cgccgtacttatcacggcgcattactcgatgcggaaattcttgctgatgtttacttaatc
atgactggtggacaaattaagtttaatttgtccaatgaaaaagcgggtcaagaaggtggc
ggaattaaaaatatcgatccttcggcgtttaatcttaaagtcgttggtgcatctgccgat
gaaatactattacacgaacaacgacttgacctcattgcgaagtcaggtaaatgtctctgg
agagggtaa
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