Shewanella frigidimarina: Sfri_2550
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Entry
Sfri_2550 CDS
T00395
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00470
D-Amino acid metabolism
sfr00550
Peptidoglycan biosynthesis
sfr01100
Metabolic pathways
sfr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sfri_2550
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sfri_2550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sfri_2550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_2550
Enzymes [BR:
sfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Sfri_2550
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Precursor biosynthesis
Amino acid ligase
Sfri_2550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
ABI72392
UniProt:
Q080C3
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All DBs
Position
3055342..3056352
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AA seq
336 aa
AA seq
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MPKINLLLLCGGGGAEHDISLMSARFFESSLAKSDKFSVLKLVLDKHGHYHTEDGKLCDL
TNRREIRFEDNSTPAWSVDYVIPCIHGFPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGVPNTPYIFLHQLDDDAIKQTETAFDNWGSVFVKAASQGSSVGCYKVDVK
ANIANVLKDAFSYAPYVVVEQTIHARELEVAVYQYQGEVVATLPGEIICDSNTFYSFDEK
YATNSKARTDVVADNLSPEISQLIRDYAVKAFKGMKLRHLSRIDFFLTADNQILLNEINT
FPGLTPISMFPKMLQNHGHNFTEYLIDVIGQQVDLT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagattaatctgctgttattgtgcggcggtggcggtgcagagcacgatatttcg
ttaatgtctgcacgtttttttgagtcatcactggcaaagtcagataaattttcggtactt
aagttagtactcgataaacatggtcattaccacactgaagacggtaaattatgcgacctg
actaatcgtcgtgaaattcgttttgaagataacagtacaccagcatggtcagttgattat
gtgatcccgtgtattcatggtttcccgggtgaaaccggcgatattcaatcatactttaac
ttaatacaactgccctactttggttgtgaatctgaagcctcaagtaattgttttaacaaa
atcaccgctaaaatgtggttttcagctttaggcgtcccaaacacgccttacatcttttta
catcaactagatgatgatgcaatcaagcaaactgaaacggcatttgataattggggatct
gttttcgttaaagcagcatcacaaggatcgtctgtgggatgctataaagtcgatgtgaaa
gccaatatcgctaacgtacttaaggatgcattcagttatgcaccttacgttgtggttgag
caaaccatccatgcgcgtgaattagaggtcgccgtatatcaataccagggtgaagtggtc
gctaccttaccgggtgagattatttgcgacagtaataccttttattcatttgatgaaaag
tacgctacaaatagtaaggctcgcaccgacgttgttgctgataacctaagcccagagatc
agtcagctgatccgtgattacgcggtaaaagcctttaaagggatgaagttacgtcacttg
tcgcgcatcgatttctttttaactgccgataaccaaattctcttgaatgaaattaacacc
ttccctgggttaacgcctatttcaatgttcccgaaaatgttgcaaaaccatggacataat
ttcactgaatatttaattgatgtgattggacaacaggttgatttaacgtaa
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