Shigella flexneri Shi06HN006 (serotype Yv): SFyv_2322
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Entry
SFyv_2322 CDS
T03315
Name
(GenBank) YdeW
KO
K11531
lsr operon transcriptional repressor
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFyv_2322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfs03000
]
SFyv_2322
Transcription factors [BR:
sfs03000
]
Prokaryotic type
Other transcription factors
Others
SFyv_2322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
HTH_Crp_2
Sigma70_r4
HTH_24
HTH_37
HTH_23
HTH_CodY
MarR
HTH_IclR
Crp
Motif
Other DBs
NCBI-ProteinID:
AIL40646
LinkDB
All DBs
Position
complement(1653558..1654511)
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AA seq
317 aa
AA seq
DB search
MTINDSAISEQGMCEEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGII
RVQINSRFEGCLEYETQLRRQFSLQHVRVIPGLADADVGGRLGIGAAHMLMSLLQPQQML
AIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIGQLNAACSVNIIPAPLRASS
ADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGA
VGDILGYFFDAKGDVVTDIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGY
INALVTDQDTAAAILRS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaacgattcggcaatttcagaacagggaatgtgtgaagaagaacaggtcgcg
cggatcgcgtggttttactatcacgacgggctgacccagagcgagatcagcgatcgtctc
ggcctgacccgtttgaaagtgtcgcgcttgctggagaaagggcatcagtccggcattatt
cgcgtacagattaattctcgctttgaaggctgtctggaatatgaaactcaattacgtcgt
cagttttcgctgcaacatgtccgggtgatccctgggcttgcggatgctgatgtcggcggg
cgactagggataggcgcggcgcatatgttgatgagtttacttcaaccacaacagatgctg
gcgattggttttggcgaggcaaccatgaatacgctgcaacgcttaagtggttttatttcg
tcacagcaaattcgcctggtcacgctctccggtggcgtcggttcttatatgacgggtatc
gggcagcttaacgcggcgtgcagtgtgaatattattccggctccgttgcgggcatcctcc
gctgacattgcccgtacgctaaaaaatgaaaattgcgtcaaagatgttctgctagccgcg
caagcagcggatgtggcgattgtcggcattggagccgtgagtcaacaagacgacgcgaca
atcattcgctccggttatatcagccagggcgaacagttaatgattggccgaaaaggggcg
gttggcgacattttaggctacttttttgatgcaaaaggtgacgttgtcacggatatcaaa
atacataacgaactgattggcttacctttaagcgcgctgaagaccatacccgtccgggtt
ggcgtggcagggggagaaaataaagctgaagcaattgccgctgcaatgaaaggcggttat
atcaacgcactggttaccgatcaggacacagcagcggcgattttacgtagttaa
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integrated database retrieval system
