KEGG   Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4262
Entry
SFyv_4262         CDS       T03315                                 
Name
(GenBank) transporter
  KO
K02669  twitching motility protein PilT
Organism
sfs  Shigella flexneri Shi06HN006 (serotype Yv)
Brite
KEGG Orthology (KO) [BR:sfs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfs02044]
    SFyv_4262
   02035 Bacterial motility proteins [BR:sfs02035]
    SFyv_4262
Secretion system [BR:sfs02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   SFyv_4262
  Type IVa pilus homolog protein
   SFyv_4262
Bacterial motility proteins [BR:sfs02035]
 Pilus system
  Twitching motility proteins
   SFyv_4262
SSDB
Motif
Pfam: T2SSE AAA_22 FtsK_SpoIIIE AAA_29 AAA_14 AAA_16 AAA_30 AAA_23 DUF87 AAA_19 ABC_tran TrwB_AAD_bind HerA_C nSTAND3 ResIII AAA_33 SRP54 Zeta_toxin SLFN-g3_helicase Kinesin AAA_7
Other DBs
NCBI-ProteinID: AIL42162
LinkDB
Position
complement(3058033..3058914)
AA seq 293 aa
MEAAPFDAPDVEELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRQGISLAL
RLLPSHCPQLEQLGAPPVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHIL
TLEDPVEYLYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALT
AAETGHLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGR
VALFELLINTPAVGNLIREGKTHQLPHVIQTGQKVGMLTFQQSYQQRVGEGRL
NT seq 882 nt   +upstreamnt  +downstreamnt
atggaagctgcgccgtttgatgcgccggacgtcgaagagctactgcgggagtggctggat
gacgatcagcgggcaatattgctggaaaatggccagctggattttgccgtgtcgctggcg
gaaaaccagcggttgcgtggcagtgcgttcgcgcaacggcaaggtatttctctggcatta
cggttgttaccttcgcactgtccacagctcgaacagcttggtgcaccaccggtattgccg
gaattactcaagagcgagaatggcctgattctggtgacgggggctacggggagtggcaaa
tctaccacgctggcggcgatggttggctatcttaatcaacatgccgatgcgcatattctg
acgctggaagatcctgtggaatatctctatgccagccagcgatgtttgatccagcagcgg
gaaattggtttgcactgtatgacgttcgcatcggggttgcgggctgcattgcgggaagat
cctgatgtgattttgctcggagagctacgtgacagtgagacaatccgtctggcgctgacg
gcggcagaaaccgggcatctggtgctggcaaccttacatacacgtggtgccgcgcaggca
gttgagcgactggtggattcatttccggcgcaggaaaaagatcccgtacgtaatcaactt
gcgggtagtttacgggcagtgctgtcacaaaagctggaagtggataaacaggaaggacgc
gtggcgctgtttgaattactgattaacactcccgcggtggggaatttgattcgcgaaggg
aaaacccaccagttaccgcatgttattcaaaccgggcagaaggtggggatgttaacgttt
cagcagagttatcagcagcgggtgggggaagggcgtttgtga

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