Shigella flexneri NCTC1 (serotype 2a): NCTC1_01171
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Entry
NCTC1_01171 CDS
T03751
Symbol
ycfS
Name
(GenBank) LysM domain/ErfK/YbiS/YcfS/YnhG family protein,Probable L,D-transpeptidase YcfS precursor,L,D-transpeptidase,L,D-transpeptidase catalytic domain
KO
K19236
L,D-transpeptidase YcfS
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC1_01171 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sft01002
]
NCTC1_01171 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sft01011
]
NCTC1_01171 (ycfS)
Peptidases and inhibitors [BR:
sft01002
]
Cysteine peptidases
Family C82
NCTC1_01171 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sft01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC1_01171 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
CDX06412
UniProt:
A0A379ZNV2
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All DBs
Position
1:complement(1115598..1116557)
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AA seq
319 aa
AA seq
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MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPASSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgagcagtcgtctggtt
ggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatataacgtcggctttctcgctctgttacaagctaaccccggcgttgatccttacgta
ccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgc
gaaggcattgtgatcaacattgcggagctgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcac
ggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
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