Shigella flexneri NCTC1 (serotype 2a): NCTC1_01270
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Entry
NCTC1_01270 CDS
T03751
Symbol
ycgV
Name
(GenBank) putative large exoproteins involved in heme utilization or adhesion,P.93,autotransport protein MisL,Type V secretory pathway, adhesin AidA,outer membrane autotransporter barrel domain,Pertactin
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Pertactin
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
CDX06510
UniProt:
A0A9P2MWV8
A0A0H2VWL7
LinkDB
All DBs
Position
1:complement(1205160..1208027)
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AA seq
955 aa
AA seq
DB search
MGIKQHNGNTKADRLAELKIRSPSIQLIKFGAIGLNAIIFSPLLIAADTGSQYGTNITIN
DGDRITGDTADPSGNLYGVMTPAGNTPGNINLGNDVTVNVNDASGYAKGIIIQGKNSSLT
ANRLTVDVVGQTSAIGINLIGDYTHADLGTGSTIKSNDDGIIIGHSSTLTATQFTIENSN
GIGLTINDYGTSVDLGSGSKIKTDGSTGVYIGGLNGNNANGAARFTATDLTIDVQGYSAM
GINVQKNSVVDLGTNSTIKTNGDNAHGLWSFGQVSANALTVDVTGAAANGVEVRGGTTTI
GADSHISSAQGGGLVTSSSDATINFSGTAAQRNSIFSGGSYGASAQTATAVINMQNTDIT
VDRNGSLALGLWALSGGRITGDSLAITGAAGARGIYAMTNSQIDLTSDLVIDMSTPDQMA
IATQHDDGYAASRINASGRMLINGSVLSKGGLINLDMHPGSVWTGSSLSDNVNGGKLDVA
MNNSVWNVTSNSNLDTLALSHSTVDFASHGSTAGTFTTLNVENLSGNSTFIMRADVVGEG
NGVNNRGDLLNISGSSAGNHVLAIRNQGSEATTGNEVLTVVKTTDGAASFSASSQVELGG
YLYDVRKNGTNWELYASGTVPEPTPNPEPTPAPAQPPIVNPDPTPEPAPTPKPTTTADAG
GNYLNVGYLLNYVENRTLMQRMGDLRNQSKDGNIWLRSYGGSLDSFASGKLSGFDMGYSG
IQFGGDKRLSDVMPLYVGLYIDSTHASPDYSGGDGTARSDYMGMYASYMAQNGFYSDLVI
KASRQKNSFHVLDSQNNGVNANGTANGMSISLEAGQRFNLSPTGYGFYIEPQTQLTYSHQ
NEMAMKASNGLNIHLNHYESLLGRASMILGYDITAGNSQLNVYVKTGAIREFSGDTEYLL
NDSREKYSFKGNGWNNGVGVSAQYNKQHTFYLEADYTQGNLFDQKQVNGGYRFSF
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaacaacacaatgggaataccaaagccgatcgtctcgctgaattaaaaatc
cgttcgccctcaattcaactgataaaatttggcgctattggtttgaatgcaattatcttt
tcccccctgctgatagctgctgatacaggaagtcaatatggcaccaatattactattaat
gatggtgacagaattacaggagataccgccgatccatcaggaaacctctatggtgtaatg
accccagcaggaaacacgcctggcaatatcaacctgggtaatgatgtcaccgtcaatgtc
aacgacgcctctggatatgcaaaaggaatcattattcagggcaaaaacagctccctgaca
gctaaccgactcacagtagatgttgttggtcaaacctctgccatcggcattaacttaatt
ggtgactatacccatgctgacttaggcacaggcagcaccattaagagtaacgatgacggc
atcattattgggcatagctcaacactaacagccactcaattcaccattgaaaactcgaac
ggtataggcctaaccatcaatgactatggcaccagtgtcgatcttggaagcggaagtaaa
atcaagaccgatggaagtacaggtgtttatatcggtggtctcaacggcaataacgccaat
ggtgctgcgcgttttacggcgacagacctgacaatcgatgttcagggctacagcgccatg
gggataaacgtacagaaaaactctgttgtcgatctcggaacaaacagtaccattaaaacc
aatggcgataatgctcacggcctctggagctttggccaggttagcgcgaatgcactcact
gttgatgtaactggagccgcggccaatggcgtcgaagttcgtggtggtacaaccactatc
ggtgcagatagccatatttcttccgcgcagggcggtggcctcgtcaccagtagttcagac
gcgacaatcaatttttctggcacggcagcgcaacgaaacagcatcttttccggcggttct
tatggtgcctcggcccagacggcaacggctgttatcaacatgcaaaataccgatattacg
gttgatcgtaatggcagtctggcgctgggtttgtgggcgctcagcggcggtagaataacc
ggagacagtttggctatcaccggcgcggcaggagccagagggatttatgccatgaccaac
agccagatcgacctcacgagcgatctggtcattgatatgagtacacccgaccagatggcc
atcgcaacgcaacatgacgatggttatgccgccagccgcatcaacgcctcgggtcgtatg
cttatcaacggtagcgttctttccaaaggtgggctaatcaatctggatatgcaccctggg
tcggtttggacaggttcctccctcagcgataatgtcaatggcgggaaactggacgttgca
atgaataacagcgtctggaacgtaacaagtaattctaatctcgacacgctggcgctgagc
cattcaactgtcgattttgccagccacgggtcaactgccggcacatttaccacattaaac
gtagagaacctgagcggtaacagtacctttattatgcgtgctgatgttgttggcgagggt
aatggcgttaataatagaggggatttattgaatatcagcgggagtagtgctggtaatcac
gtattggctatccgcaaccagggcagcgaggccacaacgggaaatgaagttctgacagtg
gtaaaaaccactgacggcgcggcctcgttcagcgcgtcttctcaggttgagttgggggga
tatctgtacgatgtgcgtaaaaatggcactaactgggagctttacgcttccgggacagtt
ccggaaccgactcctaatcctgaacccacaccagctcccgctcagcctcccatagtcaac
cccgatcctacgcctgaacccgctcccacgcctaaacccaccacgaccgcagatgctggc
ggcaattatctcaatgtcggttacttattgaactatgttgaaaaccgtacgctgatgcaa
cggatgggtgacttgcgaaatcagagtaaagacggtaatatctggttgcgcagttatggg
ggaagcctggactcctttgccagtggcaaactgagcggctttgacatgggttacagcggt
atccagtttggtggggataaacgtctctctgatgtaatgccgttgtatgtcggtctgtat
attgactcaacacatgcatcgccggactatagcggaggcgacggtaccgcacgttcagac
tacatgggaatgtacgccagttacatggcacaaaacggtttttacagcgatctcgttata
aaagcatcgcgccagaaaaatagtttccacgtactggacagtcagaacaacggcgttaac
gccaacggcactgcgaatggaatgagcatctccctggaagccgggcagaggttcaacctg
tcccctactggttatgggttctatatagagccgcaaacccagcttacatacagccaccag
aatgagatggctatgaaggcgagtaatggcctcaatatacatctgaatcactacgaatcg
ctgctggggcgtgccagcatgatactggggtatgacatcaccgcaggcaacagccagctg
aatgtctatgtgaagactggcgctatccgcgagttttcaggggataccgaatatctgttg
aacgactcccgggagaagtacagtttcaaaggtaatggctggaataacggcgtgggagtc
agtgcacagtataacaaacagcacacattctatctcgaagcggattacacgcagggtaac
ctctttgatcagaagcaagtcaacggaggatatcgcttcagcttttaa
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