Shigella flexneri 8401 (serotype 5b): SFV_1215
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Entry
SFV_1215 CDS
T00377
Name
(GenBank) putative sensor-type regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
sfv
Shigella flexneri 8401 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:
sfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfv03000
]
SFV_1215
Transcription factors [BR:
sfv03000
]
Prokaryotic type
Other transcription factors
Others
SFV_1215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
PAS_7
AAA
HTH_17
AAA_5
AAA_16
AAA_7
AAA_22
HTH_50
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABF03421
UniProt:
Q0T5J4
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All DBs
Position
1260672..1262513
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AA seq
613 aa
AA seq
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MKRETWNVPHQAQGVTFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILS
RNGDPQTLQQLSALGFNDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFC
ATPLFDSKGRLTGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLN
ALLESMDDGVISWDEQGNLQFINAQAARFLRLDATASQGRAITELLTLPAVLQQAIKQAH
PLKHVEATFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAH
MPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCEL
YGDAALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVIT
RLDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPALV
NNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSDLPE
HLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTLWRKMK
QHGIDAGQFKRRV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggagacatggaacgtaccacatcaggcccagggcgtgacatttgcttctatt
tatcggcgtaagaaagcgatgctgacgctcgggcaggctgcgctggaagatgcctgggaa
tatatggcaccgcgagagtgtgcgctgtttatcctcgatgaaaccgcctgcattctcagc
cgtaatggcgatccgcaaaccttgcagcagctaagtgcactgggattcaatgacggcacg
tattgcgccgagggaattattggtacttgtgcgctatcgttagcggctatctctggtcag
gccgtgaaaacgatggccgatcaacatttcaaacaggcactctggaactgggccttttgt
gcaacgccgttgtttgacagcaagggccgattgacgggaacaatagcgctggcgtgtccg
gttgagcaaactaccgcagctgatttgccgttgacgttggcaatcgcccgcgaggtcggt
aatttactgctgacggacagtttgctcgctgaaactaaccgtcatttaaatcaacttaat
gccctgttagaaagtatggatgatggcgtgattagctgggacgagcagggtaatttgcaa
tttattaatgcccaggcggcgcggttcttgcgccttgacgcgacggcaagtcagggacgg
gcaatcactgaactcttaacgttacccgccgtattgcaacaagcaataaaacaggcacat
ccgctcaaacacgtagaagcaacctttgaaagccagcaccagtttattgatgcggtgata
acccttaaaccgataatagaaacgcagggaaccagctttattttgttgctccatcctgtg
gaacagatgcggcagttaatgaccagtcaattaggaaaagtcagccataccttcgctcat
atgccacaggacgatccgcaaacccgccgcttgattcattttggtcgccaggcggcgcgc
agtagctttcctgtcctgctttgtggagaagagggcgtgggcaaggcactgctaagtcag
gcaattcataatgaaagcgagcgtgctgcaggtccttatatcgccgtcaattgtgagtta
tatggtgatgctgcgctggcggaagaatttattggtggcgatcgcacggacaatgaaaat
ggccgtctgagtcggctggaactggcacacggcggcacgctgtttcttgaaaagattgaa
tatctggcggtggagttacagtctgctttgctgcaggttatcaagcagggggttatcacg
cgactggatgcgcggcgtttaataccaattgatgtcaaagtgattgcaacaacgaccgcg
gacctcgcaatgctggtggaacaaaatcgttttagtcgccagctgtattacgcgctgcat
gcatttgaaattaccatcccgcctctgcgtatgcggcgtggcagcattccggcgctggtg
aataacaaattacgcagtcttgaaaaacgcttctctacgcggctgaaaattgatgacgat
gccctcgctcgcctagtttcttgtgcatggccaggcaacgattttgaactttacagcgtc
atcgagaatcttgctctgagtagtgataacgggcgcattcgcgtcagtgatttacctgaa
catctgtttaccgagcaggcgacagatgatgtcagcgccacccgcctttccaccagtctg
tcatttgcggaagttgaaaaagaggcaattattaacgcagcccaggtcacaggcggtcgc
attcaggaaatgtcggctttacttgggatcggccgcactacgctgtggcggaaaatgaag
caacatggcattgatgcagggcagtttaagcgccgggtatga
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