Streptomyces fagopyri: GFH48_18680
Help
Entry
GFH48_18680 CDS
T06986
Name
(GenBank) DUF2156 domain-containing protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sfy
Streptomyces fagopyri
Pathway
sfy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GFH48_18680
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfy01007
]
GFH48_18680
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfy03016
]
GFH48_18680
Enzymes [BR:
sfy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GFH48_18680
Amino acid related enzymes [BR:
sfy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GFH48_18680
Transfer RNA biogenesis [BR:
sfy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GFH48_18680
Prokaryotic type
Other AARSs
GFH48_18680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
TgpA_N
DUF6410
MnhB
DUF3522
Motif
Other DBs
NCBI-ProteinID:
QFZ75021
UniProt:
A0A5Q0LDL8
LinkDB
All DBs
Position
4293815..4295620
Genome browser
AA seq
601 aa
AA seq
DB search
MSGGVPDRTGGTRRIVRGPRPEAVPALVARACTLVGVLDIAAGVFPRFRRSRMHALAEVL
PGSFGPFAAALSLSAGVLLLLLAHGLRRRKRRAWRAAVVLLPAGAVAQFAYRHSIIGAVI
SLALLAPLLRHRSEFAALPDPRSRWRALANFVLMGAGSLVLGLVIVSVHEDRMVGDPSVA
DRIAHVLYGLIGFEGPVDYAGPTSWTVAFSLGALGWLTAVTTIYLAFRPEHPAARLTQDD
EARLRTLLDKHGGRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDPIGDVEAW
PGAIERFMDEAKAHSWTPAVMGCSETGGEVWTRETGLDALELGDEAVVDVADFSLAGRAM
RNVRQMVKRIERAGYETRVRRIRDLSEGELDRIRRAAEAWRGTDTERGFSMALGRIGDPS
DSDCLIATAHKADEVASPYGDLKAVLHFVPWGTDGVSLDLMRRDRAADPGMNELLIVAAL
EASPRLGIERISLNFAMFRSALARGEKIGAGPVLRAWRGLLVFLSRWFQIESLYKFNAKF
RPRWEPRFVVYASSSDLPRIGFAAMQAEGFVNLALPGLLRRRVRAPRPCAHGVTEHGVRP
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggggttccagaccgaacaggtgggacgcgacgcatagtccgtggtccccgc
cctgaggccgtccccgccctcgtcgccagggcctgcacgctcgtaggggtcctggacatc
gccgccggcgtcttcccgcgcttccggcgcagtcgtatgcacgccctggccgaggtgctg
ccgggttcgttcggccccttcgccgcggcgctctcgctcagcgcgggcgtgctcctcctg
ctcctcgctcacggcctgcgccgccgcaagcgccgggcgtggcgcgccgccgtggtgctg
ctgccggccggcgccgtcgcccagttcgcgtaccgccactcgatcatcggcgccgtcatc
tccctcgcgctgctggcgccgctgctgcgccaccggagcgagttcgccgccctgcccgat
ccgcgcagccgctggcgggcactcgcgaacttcgtcctcatgggcgccggctccctcgtc
ctcggactggtcatcgtcagcgtccacgaggaccggatggtcggcgacccgagcgtggcc
gaccgcatcgcgcatgtgctctacggcctgatcggcttcgagggacccgtcgactacgcc
ggacccacctcctggacggtcgccttctcgctcggcgcgctcggctggctgaccgccgtc
acgacgatctatctggccttccgccccgaacaccccgccgcccgcctcacgcaggacgac
gaggcccggctgcggaccctcctcgacaagcacggcggccgcgactccctcggtcacttc
gcgctccgccgtgacaaggccgtcgtgttctcgcccagcggcaaggcggccgtcacctac
cgcgtcgtctccggcgtgatgctggccagcggcgatcccatcggtgacgtcgaggcctgg
cccggcgccatcgaacgcttcatggacgaggccaaggcccactcctggaccccggccgtc
atgggctgctcagagacgggcggcgaggtgtggacccgggagaccggcctcgacgccctc
gaactgggcgacgaggcggtggtggacgtcgcggatttctccctcgccgggcgcgcgatg
cgcaacgtgcgccagatggtgaaacgcatcgaacgggctggctacgagacccgggtgcgg
cgcatccgtgacctgagcgagggcgaactggaccggatacgccgcgccgcggaggcctgg
cgcggcacggacaccgaacgcggcttctccatggcgctcggccgcatcggcgacccgtcc
gacagcgactgcctgatcgccaccgcccacaaggccgacgaggtagccagcccctacggt
gacctgaaggccgtcctccacttcgtcccgtggggcaccgacggggtctccctggacctc
atgcggcgcgaccgcgcggccgaccccggcatgaacgaactcctcatcgtggccgcgctg
gaggcgtcccccaggctcggcatcgagcggatctcgctcaacttcgcgatgttccgctcg
gcgctggcacgcggcgagaagatcggtgcggggcccgtgctgcgcgcctggcggggactg
ctggtcttcctctcccgctggttccagatcgagtccctgtacaagttcaacgccaagttc
cgtccgcgctgggagccccgcttcgtcgtctacgcctcctccagcgacctcccccgcatc
ggcttcgccgccatgcaggctgagggcttcgtgaacctggcccttcccggcctgctccgc
cgccgcgtccgggctccgcgcccctgcgcgcacggggtgacggaacacggggtcaggccg
gcgtag
DBGET
integrated database retrieval system
