Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069: SGGBAA2069_c02250
Help
Entry
SGGBAA2069_c02250 CDS
T01444
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sgg
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069
Pathway
sgg03030
DNA replication
sgg03430
Mismatch repair
sgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGGBAA2069_c02250 (polC)
03430 Mismatch repair
SGGBAA2069_c02250 (polC)
03440 Homologous recombination
SGGBAA2069_c02250 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgg03032
]
SGGBAA2069_c02250 (polC)
03400 DNA repair and recombination proteins [BR:
sgg03400
]
SGGBAA2069_c02250 (polC)
Enzymes [BR:
sgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGGBAA2069_c02250 (polC)
DNA replication proteins [BR:
sgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGGBAA2069_c02250 (polC)
DNA repair and recombination proteins [BR:
sgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGGBAA2069_c02250 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
HHH_3
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CBZ47397
LinkDB
All DBs
Position
242049..246443
Genome browser
AA seq
1464 aa
AA seq
DB search
MSELFKKLMEQIDMPLDMRQSSAFSSADIREVKVHSVSRLWEFHFSFAEILPIDIYRELS
YRLVNTFKQADIRATFDIQAETVDFSQPLLQAYYEEAFEHAPCDSASFKASFSKLKVSYD
GTKLLIEAPAFVNNDHFRKNHLPNLARQFEAFGFGKLTIDMVSDEAMTQALREDFTSNRE
AMVEKAVQENREAVKSLEASMPPTEEAPKPKFDFKERAKQRRAGFENAEITPMVEVTTEE
NRIVFEGMVFDVEKKTTRTGRHIINFKMTDYTSSFAMQKWAKDDDELKKYDMIAKGSWLR
VRGNVENNNFTHALTMNVQDVKEIVHHDRKDLMPEGQKRVEFHAHTNMSTMDALPTVEEL
IDTAAKWGHKAVAITDHGNVQSFPHGYHRARKNGIKAIFGLEANIVEDKVPIAYNPQDIE
LNEATYVVFDVETTGLSAVNNELIQIAASKMYKGNIVEQFDEFINPGHHLSAFTTELTGI
TDNHVRNAKPIEEVLQMFQDFCQDTVLVAHNATFDVGFMNANYERHGMPIITQPVIDTLE
FARNLYPEYKRHGLGPLTKRFQVSLEHHHMANYDAEATGRLLFIFLKEARENHNLTNMMD
LNTKLVAEDSYKKARVKHATIYVQNQTGLKNIFKLVSLSNVKYFEGVARIPRTVLDAHRE
GLLLGTACSEGEVFDAVLSSGVDAAVKVAKYYDFIEVMPPALYAPLLAQGTIKDEEGIRQ
VIRDLLEVGRRLNKPVLATGNVHYIEPEDEIYREIIVRSLGQGAPINRPIGRGENAQPAP
LPKAHFRTTNEMLDEFAFLGEDVAYEIVVKNTNDFADRFEEVEVVKKDLYTPFLEKSEER
VAEMTYQKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQMLVIRSNDRGYLVGS
RGSVGSSFVATMIGITEVNPMPPHYVCPNCQHSEFITDGSVGSGYDLPDKDCPECGTRYK
KDGHDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVRDIFGEQYAFRAGTVGTVADRT
AYGFVKGYERDYGKFYPEAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYP
ADDLSAEWQTTHFNFHDIDENVLKLDILGHDDPTMIRKLQDLSGIDPKDIPADDPDVMAL
FSGTEVLGVTPEQIGTPTGMLGIPEFGTNFVRGMVEETHPTTFAELLQLSGLSHGTDVWL
GNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGMWLKISDEERNG
YIEAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALRVAYFKVHYPIYYYCAYFSIRA
KAFDIKTMSAGLDAVKERMADISNKRKNNEASNVEIDLYTTLEIVNEMLERGYKFGQLDL
YRSDATEFIIDGDTLIPPFVAMDGLGENVAKQIVKAREEGEFLSKMELRKRGGVSATLVE
KMDEMGILGNMPEDNQLSLFDDFF
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaattatttaaaaaattgatggagcaaatcgatatgccgcttgacatgcgacaa
tcttctgctttttcatctgcagatattcgtgaagttaaggtgcattctgtatctcgcctc
tgggagttccatttttcatttgcggaaattttgccaattgacatctatcgtgaattgtct
tatcgattggtgaatacttttaagcaagcggatatcagagcgacttttgatattcaggca
gaaactgtcgatttttcacaacctttattgcaagcctactatgaagaagcttttgagcat
gctccgtgtgatagcgccagcttcaaggcttctttcagtaaattgaaggtctcttatgat
ggcacaaaattattgattgaagcgccagcatttgttaacaatgaccattttcgcaaaaat
catctgcctaatctagcgcgtcaatttgaagcatttggttttggcaaacttaccattgac
atggtttctgatgaagcgatgacgcaagctttacgagaagactttacgtcaaatcgcgaa
gctatggtggaaaaagcggtgcaagaaaatcgtgaggcggttaaatctctggaagcttct
atgccaccaactgaagaagcaccaaaacctaaatttgattttaaagaacgtgccaaacag
cgccgtgcaggttttgaaaatgccgaaatcacaccaatggttgaagtcacaacagaagaa
aaccgaattgtctttgaaggaatggtttttgacgttgaaaagaaaacaactcgtacagga
cgtcacattattaattttaaaatgactgactacacatcaagttttgccatgcaaaaatgg
gcaaaagatgatgatgagttgaaaaaatacgatatgattgccaaagggtcatggcttcga
gttcgtggaaatgttgaaaataataatttcacccatgcattgaccatgaatgtgcaagat
gtcaaagagattgttcatcatgaccgcaaggatttaatgccagaaggtcaaaaacgtgtg
gaattccatgcccatacgaatatgtcaaccatggatgctttgccaacagttgaagaatta
attgatacagcagcgaaatggggacacaaggctgttgctattactgaccacggcaatgtg
caaagtttcccacacggttatcacagagcacgtaaaaatggtatcaaggcgatttttggt
ttagaagctaatatcgttgaagacaaagtgccgattgcctacaatcctcaagatattgag
ttaaacgaagctacttacgtcgtatttgacgtggaaacgactgggctttctgcggtcaat
aatgaattgattcagattgcggcttcaaaaatgtacaagggaaatattgttgagcagttt
gatgagttcatcaacccaggtcatcatttatcagcttttacaacggaattgactggtatt
acggataatcatgttcgcaatgctaaaccgattgaagaagtccttcaaatgttccaagat
ttttgtcaggatactgtgctagttgcccacaatgcaacctttgacgttggctttatgaat
gccaattatgaacgtcatggcatgccaatcattacacaacctgtcattgataccttggaa
ttcgcccgaaatctctatccagaatacaaacgtcatggtttgggaccattgaccaaacgg
ttccaagtttcgctagaacaccaccatatggcgaactatgatgcggaagcaacggggcgc
ttgctctttattttcttgaaagaagcacgtgaaaaccacaatttaaccaatatgatggat
ttgaatacgaaattggttgctgaggattcttacaagaaagcacgtgtcaaacacgcgacg
atttatgttcaaaaccaaacaggtttgaaaaatattttcaaactcgtcagcctttctaat
gtcaaatattttgaaggtgtggctcgtattccgagaacggttcttgacgcccaccgtgaa
gggctcttgctaggaacagcctgctcagagggcgaagtttttgatgcggtcttatcttca
ggggtggatgctgcggttaaagtagcgaaatattatgatttcatcgaagttatgccacca
gcgctttacgctccgctattggcacaaggaacaatcaaagatgaagaaggtatccgacaa
gtcatccgagatttgcttgaggttggacgtcgtctgaacaagcctgttttggcgactgga
aatgtccattatatcgagcctgaagatgagatttaccgtgaaatcattgtccgtagttta
gggcaaggggcaccgattaaccgtccgattggtcgcggtgaaaatgcccaacctgctccg
ctaccaaaagcgcatttccgtacaaccaatgaaatgttagatgaatttgcctttcttggc
gaagatgtcgcgtatgaaattgttgttaagaataccaatgattttgctgaccgtttcgag
gaagtcgaggttgttaagaaagacttgtacacacctttccttgaaaaatcagaagaacgt
gtcgctgaaatgacctatcaaaaagcctttgaaatctatggtaatccacttcctgatatc
gtcgatttacgtattgaaaaagaattaacgtcaattttgggtaatggatttgccgtgatt
tacttggcttcgcagatgttggtaattcgttccaacgaccgtggttacttggttggttcg
cgtggttcggttggatcaagttttgtggcaaccatgattgggattaccgaagttaaccca
atgccaccacattatgtctgtccaaattgtcagcattcagaattcatcaccgatggttct
gttggttctggttatgatttgcctgacaaggattgcccagaatgtggcacacgttacaag
aaagatggacacgatattccgtttgaaaccttccttggttttgatggagacaaggttccc
gatatcgatttgaacttctctggtgatgaccaaccgtcagctcacttggatgttcgtgat
atttttggtgaacaatacgcctttcgtgctggaaccgtaggtacggtggcagatcgtact
gcttacggatttgttaaaggttacgaacgtgattatggcaaattctatccagaagcagaa
gtggaacgcttggcacaaggtgcagctggtgttaaacgtacgactggacaacacccaggt
ggtatcgttgttattccaaactacatggatgtgtatgattttacccctgttcaataccca
gcggacgatttatcagcagaatggcaaaccactcactttaacttccacgatatcgatgaa
aacgtcttgaaacttgatattctcggtcatgatgatccgaccatgattcgtaaattgcag
gatttatctggtatcgatcctaaggatattcctgctgatgacccagacgttatggcgctt
ttctcaggcacagaagtgcttggtgtcacccctgaacaaatcggaacgccgacaggaatg
cttggtattccagaatttgggacaaactttgttcgtggtatggttgaagaaactcaccca
acaacatttgccgaattgctccagttatcaggactttctcatggtaccgacgtttggcta
ggaaatgctcaagacttgattaaagaggggattgccacgctgaaaaccgttatcggttgt
cgtgacgacatcatggtttacctcatgcacgcaggtttggagccaaaaatggcttttacc
attatggaacgtgtgcgtaagggaatgtggcttaaaatctctgacgaggaacgcaatgga
tacattgaagctatgcgagaaaataatgtgcccgactggtacattgaatcctgtggtaaa
atcaagtacatgttccccaaagcccatgcggcagcctacgttttaatggcgcttcgtgta
gcttactttaaagtacattatccgatttactactactgtgcttatttctcaatccgtgct
aaggcctttgacattaagacaatgagtgctgggcttgatgcggtgaaagaacgcatggct
gatatttctaataagcgtaagaataacgaagcttcaaatgttgaaattgatttatacacc
acacttgaaattgtcaatgaaatgctcgaacgtggttataaatttggtcaacttgacctt
taccgtagtgatgcaaccgagtttatcatcgacggtgatacacttattccaccatttgta
gcgatggacggtcttggtgaaaacgttgctaagcaaattgttaaagcacgtgaagaagga
gaattcctctcaaaaatggaactccgcaaacgtggtggcgtttcagccacattagttgaa
aaaatggacgaaatgggaatccttggcaatatgccagaagataaccaattaagtctgttt
gatgatttcttctaa
DBGET
integrated database retrieval system
