Sinocyclocheilus grahami (golden-line barbel): 107549469
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Entry
107549469 CDS
T04918
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107549469
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107549469
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107549469
Ion channels [BR:
sgh04040
]
Ligand-gated channels
Glutamate (ionotropic)
107549469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Med7
Motif
Other DBs
NCBI-GeneID:
107549469
NCBI-ProteinID:
XP_016086045
LinkDB
All DBs
Position
Unknown
AA seq
1961 aa
AA seq
DB search
MVTVPTLSLLLALVEWAGQTSSSPHLLLRPRERERDPVASMHFNIAVIHAGSTVQQGEAG
AAAAAGRVPYPGFGRVHSSFGESVVTQWGSANVIWLQVNDSSPRTLLSQLCDLLAARPLQ
GLVYEDERPLPLASGPLAPMLEFVSAQTGLPIVAVGGGAGLGRVPQETGSIFLQFSSSTA
LQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVMLNLTDDP
GGARARRLLKENDAQVRLLYCSQEEAEQVFHAAWAAGQASASHIWFAVGPALSELGLTGL
PSRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGPHFVTNCQTDGNGTQRI
RGRMKYFSNITLGGRDYSFNNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRYPAWS
RYGPFLQPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASALQEGVAP
MKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGS
LTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAV
TVFIFEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMV
LVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTDQYPPLKFGTVPNGSTE
KNIRSNYPDMHQYMIKYNQRSVEDAISHLKTGKLDALIYDAAVLNYMARKDEGCKVMTIG
SGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDKIEVMSSK
LDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMSKMGQSGKLDFLLAFSRGMYSC
CSFEDETAQGGAKVTVPGHHHTAMVPASSSHVVTSAVSTSAIAMVQQQQQPQQPQPPQSY
KTPLPGSPPTIVHSGAVLGPTNTQLVGAPLPCTTFLPRPDRRLAVVDRWRLPKTTSATTS
MGVRGALAETGPLPQKVPPTWAGGGGAGSGLDGYKRYYGPIDPEGLGPCVDQQTGSQTPK
AVPRAHQQPPPTSVVFYQEKGMDHGMGKKVGAGTGGGGQGRGVKSLGTPRLPPKGQAPAP
LTPNPPLQHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGGGREASRRPRPSPPL
PIPVPVTLSPSYTPPSPSPSLPYTSTSSSSSTTSSSTTSSATSSRSTSPSSTSTASSRST
RDIEAEEEDEEDLDELTEESSLLQGQNRTRDRERSILSPRSLTHGLPPPIPPRKPWGTFG
DREHKKDRERERGGSQLAQLQEWWAGWAERERDRERSGGAQGDTERKRERKHRKEREKEK
KKKKKKNKKRKKREERERERERERKRRKVKKKKKKAMKTKKKKKVPSGKRSEPEEGDVEA
ERDGEGDGDREGEYSSFSTQYRSGFVDKGSLSAWEGERERGRRDGGEDDRDEREDESGGG
RGREIRPKSSHLRHRPSCKRYPNLNKLPSSVKFWVSGGEAGGTEASGPSPPSSLHTLLSS
SKRRSSSGVEREEEGRVGERKPLLLHYERGRVNTREGLSFHEWDSEDEEEEGEEEERERE
RERERIEERVRRAGRGAVSESERDRIRTEESFSDEGSSGEFGRFERYWEGTGAGGASGIG
GGGWFFGTYPAREKGGSVNSRDDSILGRAEGWGLAGDFWGSGSGPGIGWGSGGGSGGLGS
QWPPPPTSLPPPRRYWSVDKLQMKGEKRSRSGSKSKGQRSRERMQDAASCTCTQYGHGRP
HIHHKHSSTQSHSQEDLLPHCHSFSGSSRPKPPPIPDKSKSGSQSNLNSQQAQLSEHIPH
PSPSPPQPLLPSLPLPSAPNSLPMPIPPPPSSASMSPPPVLSPGGASGSSQAATASAKLQ
YQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagtacccacactctctctgctattggccctggtagaatgggcgggtcagact
agctcctctcctcatctcttgctccggccccgagagcgtgaacgggacccggtggcatca
atgcacttcaacatcgcagtgatccacgcgggctcaacggttcaacaaggggaagcaggg
gctgcagcagctgcgggtagggtgccatacccgggcttcggacgtgtgcacagcagcttc
ggtgagagcgtcgtcacccagtggggatccgcaaatgtaatttggctccaggtgaatgac
agcagccccaggacgctgctctctcagctgtgtgacttgctggcagccagaccccttcag
ggacttgtgtatgaagatgagagacccctcccgctggcctctggccccctggcccccatg
ctggagttcgtttcagcccagaccggcctccccattgttgctgtgggagggggagcgggt
ctgggcagggtaccacaggagaccggctcaatcttcctgcagttcagctcttccaccgca
ctccagttggaggtgatctttgaggtgctggaggagtacgattggacggccttctcggtg
gtgtccacacgtcaccatggctaccaggacttcctgtcagtagtggaaggtttgaccgac
gggtcattcatcggctgggagaagaagagcgtagtgatgttgaatttaaccgatgatccg
ggaggagcacgcgcacggcggctgctgaaagagaacgacgcacaggtgcggttgttgtac
tgctctcaggaggaagcagaacaggtgttccatgctgcttgggcagctggtcaggccagc
gcctctcacatatggttcgcggtgggtccagctttgtccgagctgggcctgaccggacta
cccagtcggctgtttgcggtcagaccacagggctggagggacgagccccgcagacgtatc
gcccgtggggtgtccattcttactcatggagctgtcgcgttgcgtaaggactatggagcc
actggagggccgcactttgtcactaactgtcagacggatggcaacggaacacagaggatc
cgcggtagaatgaagtatttcagtaacatcacgctcggtgggcgggactattcgttcaat
aacgagggctacctggccaatccctttctggatgtcatctcctacacgcctgggagtggc
tgggaagacgtaggatggtgggagaatggggtgttacgtctgaggtaccctgcttggtct
cgatatggtcccttcctgcaaccgcccgatgatgctcagcacctgagggtggtgaccctg
gaggagcggcccttcgttatcgtggagcttgcagaccctgcctctggaacctgcattaga
gactctgtgccatgcagacgtcctctcaatgccagtgcacttcaggaaggggtggcaccc
atgaaacagtgctgcaagggattctgcatcgacatccttaagcgattggccaaaattgtt
ggcttcacctatgacctctacttggtcaccaatgggaaacatgggaaaaagattgatgga
gtttggaacgggatggtgggagaggttgtgtacaagcgggcagacatggcgatcggctct
ctcactatcaacgaggagaggtcagaggtcgtggacttctctgtgcccttcgtggagacg
ggcatcagtgtcatggtctctcgcagtaacggaaccgtatctccctctgcttttcttgag
ccgtacagccctgctgtgtgggtgatgatgtttgtaatgtgcctgaccgtggtggcagtg
acggttttcatctttgagttcttcagtccagtggggtacaaccgtagccttcagagtggc
aagaaggccggaggttctaagttcacaatagggaagtcaatctggcttctttgggctctg
gtctttaataactccgttccagtggagaaccccaaaggaaccactagcaagatcatggtt
cttgtctgggctttctttgctgtcatcttcctggctagctacactgccaacctggctgcc
ttcatgatccaagaggaatacattgacactgtgtctggcctcagcgataaaaagtttcag
caccccacagatcagtacccccctctgaaatttggaacggtccctaacggaagcacagag
aaaaacatccgcagtaactatccagacatgcaccagtacatgatcaaatacaaccagaga
agtgtggaggatgccatctcccacctcaagactggtaaactggatgccttaatctatgat
gcggctgtattaaactacatggctcgtaaagatgaaggctgtaaagtaatgaccatcggc
tcagggaaagtattcgccacgactggttatggcatcgccctaatcaagaactcccgctgg
aaacggccattggacctggccttactgcagctggtgggcgacgatgagattgagatgcta
gagcgtctctggctctcagggatctgtcataatgataaaattgaggtgatgagctccaaa
ctagacatagacaacatggctggtgtcttctacatgctactggtggccatgggcctaagt
ctgctggtcttcgcctgggaacacctggtttactggaggctacggcactgcatgagcaaa
atgggccagtctggcaaactggacttcctactcgccttcagcaggggaatgtatagctgc
tgcagttttgaagatgaaactgcacaaggtggggctaaagtcacagttcctggccaccat
catactgccatggttcctgcttcttcctcacatgtggtcacttcagctgtatccacttcg
gccattgccatggtgcagcagcagcagcaaccacaacagcctcaacctcctcagtcttac
aaaacacctcttcctggatcccctcccacaattgttcattctggagcggtcttgggtccc
acaaatactcaacttgtaggagctccactaccatgcactactttcttaccccggcctgat
cgcaggttggcggttgtggaccgctggagactacccaaaaccactagtgccacaacctcc
atgggtgtgagaggagctctagcagaaacaggacccctgcctcaaaaggtgccacctacc
tgggcaggtggtggaggtgcaggtagtggtctagatggatataagcgctactatggacct
attgatccagagggacttgggccatgtgtggaccaacagacaggctctcaaactcccaaa
gcagtccccagagcccaccaacaacccccaccaactagtgtggttttctaccaggagaag
ggcatggaccatggcatggggaagaaggtgggagcgggtactggtggagggggtcagggt
agaggggttaaatctctggggactcccaggcttcctcctaaaggccaggccccagcccca
ctgacacctaaccccccgctgcagcacccctctccccctctcccttcatctttctggagg
aaacggcgaccaaaaaagcccaaagaacctggtggcccattgtacgagaacatcctgcca
ctgggccggagaggtggaggcagggaagcgagtcgaagaccgagaccctctcctcctctc
cccatccccgtgccagtcacactttccccaagctacactcctccatccccctctccctca
ctaccctacacctccacatcatcctcctcatccaccaccagctcctcaaccacatcctca
gccacatcctcacgctccacctctccttcatccacttccacagcttcatctcgtagcacc
agagacatagaggctgaggaagaggatgaggaggatttggatgagctgaccgaagagtct
agtcttctgcagggccaaaacagaaccagggaccgagagcggtccatactttcccctaga
tctctcactcatggacttccccctcctatacccccacgcaaaccgtggggcacctttgga
gacagagagcataagaaagacagagaaagagaaaggggtggcagtcaactagcacagctt
caggaatggtgggcaggatgggcagagagagagagggacagggagagaagtggcggagcc
cagggagatacagaaaggaaaagagagaggaaacataggaaagagagggaaaaggagaaa
aagaaaaagaagaagaaaaacaaaaaacgaaaaaagagggaggagcgtgaaagagaaaga
gaaagagaaaggaagcgtcgtaaggtgaaaaagaagaaaaagaaggcaatgaaaacaaag
aagaagaagaaggtgccatccggcaagcggtcggagccagaggagggtgatgttgaggca
gagagagatggagagggggatggggatagagagggagagtactcttcattttccactcaa
tatcgcagtggatttgtggacaaaggcagcctttcagcttgggagggagagagagaaaga
gggaggagagatggaggtgaggatgacagggatgaacgagaggatgaaagtgggggaggt
agaggcagagagataagacccaaaagctcccatttacgacaccgaccatcctgtaaacgc
tatcccaacctcaacaaacttccctcttcagttaaattctgggtcagtggaggtgaagca
ggtggcacggaggcctccggaccctcccctccctcctctttacatacactcctctcctcg
tccaagagacggagtagtagtggggtagagagagaggaagaagggagagtaggagaacgc
aagccactgcttctccactatgaaagggggcgagttaacacaagagaaggcttgtccttc
catgagtgggactctgaggatgaggaggaagaaggggaagaagaggagagagagagagaa
cgagaaagagagagaatagaggagagagtgcgacgggcagggagaggtgcagtgtcagag
tctgaacgggatagaatcagaacagaagaaagcttttccgatgaagggtcctcaggagag
tttggccgttttgagagatactgggaaggaactggagcgggtggagctagtggaattggg
ggtgggggctggttttttggaacgtatcctgctcgagagaaaggtggaagtgtcaacagt
agagatgactctattttgggtcgggcagaaggatggggattggcaggtgatttttggggt
tcgggttcgggtccggggattggatggggatctggaggaggcagtggagggctaggttca
cagtggccaccccctcccacttccctgccgccaccacggcgctactggtcagtcgacaaa
ctacagatgaagggtgagaagcgaagccgcagtgggtcaaagagcaaaggtcagaggtct
cgggagagaatgcaagacgcagcatcatgtacgtgtacacagtatgggcacggtaggccc
cacatacaccacaaacacagcagcactcagtctcacagccaggaggatctgcttccccac
tgccacagcttcagtggaagctctcggcccaaaccaccccctatacctgacaaatccaaa
tccggaagccagtccaaccttaactcccagcaagcccagctctccgaacacataccccat
ccatcaccctccccacctcagccactcctgccctcattgcctctaccttctgctcccaac
tccctacccatgcccattcctccacctccatcctctgcatccatgtcccctccacctgtg
ctctctcccgggggtgcttccggctcctcccaggcagccaccgccagtgctaagcttcag
taccagagacttcggtctgtgccccagccaaggcgattctactccccacacctgccactc
aaagccaagagtttgtgctcacgtcgtggttctgcccatttctccagcctagaaagtgaa
gtatga
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