Sinocyclocheilus grahami (golden-line barbel): 107552278
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Entry
107552278 CDS
T04918
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04136
Autophagy - other
sgh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107552278
04136 Autophagy - other
107552278
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107552278
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107552278
03029 Mitochondrial biogenesis [BR:
sgh03029
]
107552278
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
107552278
Membrane trafficking [BR:
sgh04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
107552278
Mitochondrial biogenesis [BR:
sgh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107552278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
107552278
NCBI-ProteinID:
XP_016089626
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MKLLKSTILLSSTKHAPVIGEAVSTVWEFVVKYATLTYDSLRFGEIEDFPETSEPVWILG
QQFSALTEKDEILADVTSRLWFTYRKNFQPIGGTGPTSDTGWGCMLRCGQMILGQALICR
HLGRDWRWSPGQRQRAEYINILNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQ
VLKKLAVFDSWSRLAVHVAMDNTVVIEEIKRLCMPWLDFDRGACAVSEEPREMNGDLEGA
CALAEEETALWKPLVLLIPLRLGLSDINEAYIEPLKQCFMMPQSLGVIGGKPNSAHYFIG
FVGDELIYLDPHTTQPAVDPNEDEQFPDDSYHCQHPPCRMHICELDPSIAAGFFCQTEDD
FDDWCAQIRKVSNCRGLPMFELVDSQPSHLITADVLNLTPDFSDSDRLERFFDSEDEEFE
ILSL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgttaaaaagcacaattcttctatcgtcaaccaagcacgcgcctgttattgga
gaggcggtctctacagtttgggaatttgtcgttaaatatgctactctcacgtacgactca
ttgcgctttggagagatcgaagatttcccagagacctccgagcctgtctggattttggga
cagcagttcagcgctctaacagagaaggatgagattctggcagacgtcacctcacgtttg
tggttcacgtacagaaagaacttccagccaattggtggcactggtcccacttcagacacc
ggctggggctgcatgcttcgatgtggacagatgattcttgggcaggccttgatctgcagg
cacttaggtagagactggagatggagtccaggtcagcggcagagagcagaatatatcaac
attctcaatgccttcattgacaagaaggacagctattattccatccatcaaatagctcaa
atgggtgttggtgagggcaagtctataggccagtggtatggtccaaatacagtggcacag
gtactcaagaaactagcagtttttgactcctggagccgactggcagttcatgtagctatg
gacaatactgtggtcatagaggaaatcaagaggttgtgtatgccatggctggacttcgac
aggggtgcatgtgcagtttctgaagagcctcgggaaatgaatggcgatcttgagggggct
tgtgctctggcagaagaggagacggctctgtggaaaccccttgttctgctgattccacta
agactgggcctcagtgacatcaacgaagcctatattgaaccactcaagcaatgcttcatg
atgcctcagtctttaggagtaataggtgggaagccgaacagtgctcactacttcattggc
tttgtaggtgatgagctcatttatctagaccctcataccactcagccagcagtggaccca
aatgaagacgaacagttcccagatgactcctaccactgccagcaccctccctgccgaatg
cacatctgtgagcttgacccctccattgctgctggcttcttctgtcaaacagaggatgat
tttgatgactggtgtgcacagattcgtaaggtttcaaactgtagaggtcttcctatgttt
gaattggtagacagtcagccatctcatttaattaccgcagatgtacttaatctcactcca
gacttttcggattcagaccggctcgaacgcttctttgattcggaggatgaagaatttgaa
atcctgtctttgtga
DBGET
integrated database retrieval system
