Sinocyclocheilus grahami (golden-line barbel): 107553531
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Entry
107553531 CDS
T04918
Symbol
ushbp1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107553531 (ushbp1)
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107553531 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
RasGAP_C
GAS
Leu_zip
Motif
Other DBs
NCBI-GeneID:
107553531
NCBI-ProteinID:
XP_016091279
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MLRLHTQNAETIWTKHLSAAQESWVQATQVLEEMETDLGISYPSALPPDERRQYQRDVLS
LYKHNQDLNTSLKSRQGSGPEEEMAVWSELFSSCQSIIRTSSPCFSSPPYPGSPLLSRKL
PGFRPDSPPSPCTVDSALQAEMDKLQRCLERLKARNERLNAALVKKKGESEQLSMSLSRQ
EADSSALHMALAYCEECEEAYRDLLSLCEATKQQNAETISTPQPDLAKSTNENLDTGEAS
SSPPEGTAETRPNSLSEQEFEDKAGVILQRISRLKQDRAAVCIPQQGAAGEGKISPDTGT
LAGVRGRASSLSKNTKEEKAALLYELLTVREEMSEMCGNLRLLEKERWCLDLALMVQSAQ
DSAGALILDSLRDELGERRATQQRIAENLVKLEGGGRIPDRRNHSILRELQATLQREQSP
RKRVAALRESLDSALADSTTQRRINREEIARLSRYYNKVSSTYRSSRKKHQEQLW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggctgcacactcagaatgctgagacaatctggacaaagcatctctctgcagcc
caggagagctgggttcaggccacacaggtgctggaggagatggagacggatttggggatc
tcatacccctctgctctgccccctgatgagagacgtcagtatcagcgggatgttctctcg
ctgtacaaacacaaccaagacctcaacacctcattgaagagccgacagggtagtggacct
gaagaggaaatggctgtatggagtgagttgttctcctcctgtcagtccatcattcgaact
tcgagcccttgcttttcctctcctccatatcctggatcccctctgctgtcccgcaaactg
cccggcttcaggccggactcccctccgtctccctgcactgttgattctgcgcttcaggct
gagatggataagctgcagaggtgtctggagcgactgaaagctcggaatgagcgtctgaat
gccgcactggtcaaaaagaaaggagaatcggagcagctgagcatgagtcttagccgacag
gaggcagacagctcggctctacacatggctctggcatactgtgaggagtgtgaggaggct
tacagagacctgctgtccctgtgcgaagccacaaaacaacagaatgcagaaacaattagc
acaccccagccagacctcgcaaagtcaacaaacgagaacttggacacaggcgaggcatcc
tccagtccaccagagggcactgctgagaccagaccaaacagcttgtcagaacaggagttt
gaggacaaggccggtgtaattttgcaaaggatctccaggctgaagcaggacagggccgct
gtttgtatcccgcagcagggcgcagcaggagaaggcaagatcagtcccgacactggcacg
ctcgcaggggtcagaggtcgtgctagttcactttccaaaaacaccaaagaggagaaagca
gctctactgtatgagctgctgacagtcagggaggagatgtcagagatgtgtgggaatctc
cggctcctggagaaagagaggtggtgtttggacctggcgctgatggtccagagtgcccag
gattctgctggtgctctgatcctggacagtctgcgagatgagctgggggagaggagagcc
acccagcagagaattgctgaaaatctggtaaaactagaaggtggaggaagaattcctgat
cgtcggaatcactctatcctaagagaactacaagcaacactgcaaagggaacagtcaccg
aggaagagagtggcagctttacgtgagtcgctggactcggcgctcgcagacagcaccact
cagaggaggatcaacagagaggagattgcacgcctctcccgctactacaataaagtttca
agcacctacagaagttctcgaaagaagcaccaggagcagctgtggtga
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