Sinocyclocheilus grahami (golden-line barbel): 107565043
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Entry
107565043 CDS
T04918
Name
(RefSeq) collagen alpha-2(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
107565043
NCBI-ProteinID:
XP_016105714
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MLAVLCVLLALGNHALGGGYAPMPQMKYVQPIMKGPVGPPFREGKGQYLEFPPVMDIKGE
PGLQGKPGPRGPPGPPGLPGKSSIGQPGLNGQTGPSGPPGFPGIGKPGLPGLPGKIGPKG
PSGLNGEVGPRGEVGTRGLPGQPGAPGPAGLSLNGRPGLPGTRGPPGSRGDLGPKGGHGI
PGEQGPKGENGNGKPGSIGPRGPIGLQGPPGLPGFPGLGKPGIDGFPGPVGPKGDKGVPG
LQGVPGESGLPGLQGQPGAPGVGKPGLGGAPGNPGPIGPKGDVGSRGTPGFPGPPGYGKP
GLVGQKGDRGPAGLEGAPGDKGEPGMDGLPGDSGPTGQPGLSGSQGPMGLPGKHGMSGLK
GENGPQGPPGLPGLRGDQGPSGLPGKPALPGDKGLPGLNGATGKPGPKGEPGHIGLPGNP
GLIGGPGSKGENGFPGPPGPRGNSGIPGLPGPTGHMGPQGVPGLKGEQGPPGPQGIGKPG
DKGMPGPQGPPGRPGPSGISGIQGPPGPPGPPGSPGPPNGDINQLAVQGPNIVGESIPKP
NGEKPYFGQAELSASVAPAFTAILTTPFPPSGMPIKFDRILYNGQNAYNPATGIFTSPLP
GVYYFAYHVHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKENDQVWVQM
PSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagtgctctgtgtcctgctagcgttggggaatcatgccctgggtggaggttac
gcccccatgcctcagatgaaatatgtgcagcccataatgaaggggcctgttgggccaccc
ttcagagaaggcaagggccagtatcttgagtttccaccggtgatggacattaaaggggag
ccaggtcttcaagggaaaccaggaccaaggggaccacctgggcctcctggattaccaggg
aaatcaagtataggacaacctggtctaaatggtcaaacaggtccttcagggcctccagga
ttccctgggattggaaaaccagggctaccaggtttaccaggaaagataggacctaaagga
ccttcaggactcaatggtgaggttgggcctcgtggagaggtgggtacacgtggacttcca
ggtcagccaggagcacctggaccagcaggtctgtcattgaatggtagaccagggttacct
gggactagaggcccaccaggatcaagaggtgatttggggcctaaaggcggacatggtatt
cctggtgaacaaggacctaaaggggaaaatggcaatggaaaaccaggttcaataggtccc
aggggacccattggccttcaaggacctccaggacttccaggttttcctgggttgggtaaa
ccagggattgatggatttcccgggccagtagggccaaaaggagataaaggagttccagga
cttcaaggtgtcccaggggaatctggtctccctggactacaaggtcagccgggggcacct
ggtgtaggaaaacctggacttggtggtgctccaggtaacccaggcccaataggtcctaag
ggtgatgttgggtccagaggaactcctgggtttcctggtccccctggctatggtaaacca
gggcttgtaggacagaaaggagacagaggtcctgctggattagaaggagcccctggtgac
aaaggagaacctgggatggatggtctaccaggagattcagggccaactggacagccaggg
ctttcaggttcacaaggtcctatgggtcttccagggaaacatgggatgtctggtctaaag
ggagagaatggcccacaaggacctccgggattgccagggcttagaggagatcagggtccc
agtgggctcccaggaaaacctgccctcccaggggataagggccttcctggtctcaacgga
gccacaggcaaacctggacctaaaggtgaaccgggtcacatcggactgccaggtaatcct
ggtttgattgggggaccaggttcaaaaggtgagaatgggtttccaggaccccctgggcca
cgtggcaattcagggattcctggactcccaggccccactggtcatatgggacctcaaggt
gttccagggttgaaaggcgaacaaggtccaccaggcccccaaggaattggaaagcctgga
gacaaaggtatgcctggcccacaaggacctccaggaagacccggcccttctggaattagc
ggtatacagggccctccaggtccacctggacctcctgggtctcctggaccgccaaatggt
gatataaatcagttagcggttcaaggaccaaatattgtaggagaatccattccaaagcca
aatggtgagaaaccctattttggtcaggctgagctctctgcctccgtggctcctgctttt
actgctattttgacgacaccatttccaccatctggaatgccgatcaaatttgacagaatt
ctgtacaatgggcaaaatgcttacaaccctgccacaggcattttcacaagcccactgcct
ggagtctactattttgcttatcatgtacatgtaaagggaaccagcctgtgggtggcactg
tataaaaacaatgtgccagccacatacacctatgatgaatacaagaagggctatatggac
caggcatcaggtagtgcggtactagagctgaaagagaacgaccaggtctgggtgcaaatg
ccctctgaccaagcaaatgggctctactccactgagtacatccattcgtccttctcaggg
ttcctcctgtgccccacataa
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