Sinocyclocheilus grahami (golden-line barbel): 107565933
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Entry
107565933 CDS
T04918
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgh01002
]
107565933
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107565933
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107565933
Peptidases and inhibitors [BR:
sgh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107565933
Ubiquitin system [BR:
sgh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107565933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
DUF2259
Dsc3_N
DUF2014
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
107565933
NCBI-ProteinID:
XP_016106734
LinkDB
All DBs
Position
Unknown
AA seq
2414 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGDSPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSSQALNVQIIAALIKPFGQCYEFLTLQTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVAEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQLVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTAL
DALSKEKAWQTFIIDLLLHCQSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFHIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLAASRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
LPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQQQV
VQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGGGGEGERNRWYKFDDGD
VTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSE
LVKYITELTVTSKHHQVKMPSAIERGVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNGVYL
NSPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNV
RYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSS
QSCDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPAT
FMLVALDEGSGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNQYGDPNI
TAPIMPLQQLVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSFF
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgacggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaac
gaaaactccccagtgagcccaccagatgaccagggtcagggggacagtcccacacccctg
gaggaggaggagccagctttcccccacacagaactggccaagctggatgacatgatcaac
agacctcgctgggtcgttccagttttaccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagtggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcaatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagacggtgcctgctggggtt
cagctagctgaggatgagctttttgcccgtccacctgaccctcgctctcctaagggctgg
ttggtggacttgataaacaaatttggcacgttaaacgggtttcaaattctgcacgatcga
ttcatgagcagccaagctctgaatgttcagatcatcgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcaaacggtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcaccgatgaggaattgaaaaaggaagcaaagaat
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagaacctggcttctcga
gtaccaggacaagaagaaacagtgaagaatttagagatatttaggttaaaaatgattctt
aggttattgcagatttcttcttttaatggaaaaatgaatgcactaaatgaagtaaacaag
gtgatttcaagtgtttcctactacacacatcgtcatggcaatcctgaagaggaagagtgg
ctgacggcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgcttcaggacctggacaacatctgggcagctcaggctggg
aaacatgaggctattgtcaagaatgttcatgatctccttgcaaagctggcgtgggatttc
tcacctgaacagctggaccatctctttgactgcttcaaggagagctggacaaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtgctcaatctgctgtggaatttggcccatagtgatgatgtt
cctgtggatatcatggaccaggcccttagtgctcatatcaaaattttggactatagctgc
tcccaggacagggacacacaaaagatgcagtggatagaccgattcatagaagaattaaga
actaatgacaaatgggtgattcctgctctgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacgcagcggagcccacatgtcttttatcgacatgacctaatcaaccaactgcag
cacaaccatgcactggtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcatacagactttgatccccagacggttaggccaggaagtcgg
tatagtcatgttcaagaggtccaggagcggcttaatttcttgaggttcttactgaaagat
gggcaactctggctatgcgcacctcaggctaagcagatctggaagtgcctggcggagaac
gcagtgttcttgtgtgatcgggaggcctgcttcaaatggtactccaaactcatgggcgac
gaacccgaccttgaccctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcactgctgacagagaatgggatgaaatgctttgaacgattcttcaaggctgtc
aattgcagggagggcaaactggtggcaaaacgccgggcatacatgatggatgacttggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgatattgctagc
cgagcaattgacttgcttaaagagatttatacaaacctcggaccaaaactacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgatcggctcaaagcctcctac
gacactctgtgtgtgctggacggagataaagacagcattaactgtgccagacaggaggct
atccgcatggtgagagtgctgactgtgctcagggagtatataaccgagtgtgacagtgac
taccatgaggagaggaccatcctgcccatgtccagggctttccgaggaaagcatatcacg
ctagttgtgcgtttcccaaaccaaggccgacaagttgatgatctggatatttggtcacat
accaacgacacgattggttctgtgcgacgttgcattctgaaccgaataaaggccaacagc
acgcacaccaagattgagctgtttatcgggggagagatcatagacccagcagatgacagg
aagctaatcgggcagctaaacctcaaagataaaactctcatcacagccaagctcacccag
gtcagcgccaatatgccttccagtccagacagctcctcagactcctccactggctctcct
gggaaccatggcaatcactacagtgatgggccaaaccctgaagtggagagctgtcttcct
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagacttg
ggctgtaatctcaacatgcctctcctgcgggatggagctcgtgttctaatgaagctcatg
cctccagataacaccacagtggaaaacctgcgagccgtctgtctggatcacgccaaactc
ggcgaaaacagccttagccccacattggattcacgtttctttggaccatcaccatctcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcccgccagtgggacgttgggt
gaggatgcaagtgacttccagtacaacttcttgaagagtggtggcctgcctctggttttg
agcatgctcaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaacgcactaaaaatagccaaactgctgctcacagctgtaggctttggccatgtg
aaggctgtggcggaggcctgccagcctgtggcggaggggactatccctgtgtcacctatc
aaccagaccacacatgaccaggctctagtgctacagaacgccttgcagaatatcccaaac
ccctcagccgagtgcatgctgcggaacgtggccatccgcctcgcccaacagatctcggat
gagaactttttccaggcctccaagtacatcccagatatctgtgtcattcgagcagttcaa
aagattgtctgggcttctggctgcggctcggttcagctcgtcttcagttctaatgaggag
atcagcaagatctatgagaagaccaatgctggcaatgagccggatgcagaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgtttcgcccttatgcccactgcacta
gatgcacttagcaaagaaaaggcctggcagaccttcattatagatctgctgctgcactgc
cagagcaagtctgttcgccaaatggcccaagaacagttcttcctcatggccacccggtgt
tgtatgggccataggcctctcctcttcttcatcaccctcctcttcacagttttaggtagc
actgcaaaagagcgggcaaagcacgctgctgattacttcactcttctaaggcacttactc
aactatgcatataacagcaacattaatcttcctaatgcagaagttctcttaaacaatgag
atcgactggttaaagcgcatccgggatgaagtaaagaggactggagagcctggggttgag
gagaccattttagaaggtcatattggtgtcacaaaagagctactagctttccagacccca
gagaagaagttccacattggctgtgaaaaaggaggtgctagtcttatcaaggagttaatg
gatgacttcctgttcccagcatctaatgtgtacttgcaatacatgaagagtggagaattc
cccactgagcaggccatacctgtgtgtagcaccccagccaccatcaatgccggctttgaa
ctgctggttgcacttgcagtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttaccgccagtt
ggcccaaggcccaccaaggggtttgtgggtctgaaaaatgcaggtgcaacttgctatatg
aactcagtgatccagcagctctacatgattcctcccatcaggaatggcatcctggccatt
gaaggcacgggcagcgatgtggatgatgatatgtctggagacgagaagcaagataatgag
agtaatgtagatccccgggatgaagtgtttggatatcagcaccagtttgaagacaaacct
tctctaagtaagtcggaagacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatttttggacacttggctgcctccaggttgcaatactatgtgccgaggggattctgg
aagcaatttcggttgtggggtgaaccagtcaatctgagggagcagcatgatgccctggag
ttctttaactcgctggtagacagtttagatgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtgctgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgtgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctcctcgattctatggagcagtacgtgaaaggagacttgctcgagggtgcaaatgcc
taccactgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactcattaagaag
ctccctccggtgctggccatccagctgaaacgcttcgattatgactgggaacgagagtgt
gccatcaagttcaatgattactttgagttcccacgggagttagacatggagccctataca
gtagctggagtagccaagctggaggggtctgatgtgcacccagagaaccagcagcaggtg
gtccagcagaatgagccgtcagagccggaacccccctgcagctctcgttatcgtttggtg
ggagtgctggtccactcaggccaggctagtggaggtcattattactcctacatcattcag
aggaatggcggtggtggtgagggagaaaggaaccgttggtataagtttgatgatggagat
gtcactgagtgcaagatggacgatgacgaggagatgaagaaccagtgctttggtggagag
tacatgggtgaggtctttgaccacatgatgaaacgcatgtcctacaggcgacagaagcgc
tggtggaatgcctacatcctcttttatgagcgtatggacacgttagacaaggacagcgag
ctggttaaatatatcactgagctcacagtgaccagcaaacatcaccaggtgaagatgccc
tctgctatcgaacgtggtgtgcgcaaacaaaatgtgcagttcatgcacaaccgtatgcag
tacagcttggagtacttccagttcatcaggaaactgctgacctgtaacggtgtctacttg
aactcacctccaggtcaagaccatcttttgcctgaagcagaagaaatggctatgattagt
atacagctcgctgctaggtttctcttcagtactggattccacaccaagaaaattgtccgt
ggccctgctagtgattggtatgatgctctgtgcatcttgctacggcacagtaagaatgtg
cgctactggtttgcacacaacgtcctctttgcatatccgaaccgcttctccgagtacctg
cttgagtgtcccagtgccgaggttcgaggagccttctccaaactcattgtatttattgca
catttctccctgcaagatggaccctgcccttcacccattgcttcacctggaccttcaagt
cagagctgtgataatttgagtttaagtgagcacttgttccgtgctgtacttaatctgctg
agaagggaagtgtctgagcacggccgtcacctgcagcagtacttcaacctttttgtcatg
tatgccaaccttggcttggcagagaagacgcagctgttgaagctcggggtaccagctacc
ttcatgcttgtggctctggatgaggggtccggccctcccattaagtaccagtatgctgag
ctcggaaagctctatactgtcgtctcgcagctggttcgctgctgtgatgtgacatcacgt
atgcagtcctcaatcaatggaaaccctcccctgccaaaccaatatggtgaccccaacatc
accgctcccatcatgcctctgcagcagctggtggtggacatcctgtttgtgcgcaccagt
tatgtgaagaagattatcgaggactgcagtaactcagaggacactatcaaactgctgaga
ttctgctgttgggaaaaccctcagttttcctccactgtgctgagtgaactactgtggcag
gtggcatattcatacacgtatgagttaaggccttacctggacttgctccttcaaatcttg
tttattgaggattcatggcagactcacaggatccacaatgtgctgaagggaatccctgat
gaccgggatgggctttttgacaccattcagcgttccaaaaatcactaccaaaagagagct
tatcagtgtatcaaatgcatggtggctcttttcagctttttttaa
DBGET
integrated database retrieval system
