Sinocyclocheilus grahami (golden-line barbel): 107572021
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Entry
107572021 CDS
T04918
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
sgh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107572021
04148 Efferocytosis
107572021
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107572021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107572021
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107572021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
WD40_like
CYP38_PsbQ-like
zf-FCS
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
107572021
NCBI-ProteinID:
XP_016113907
UniProt:
A0A672NFV3
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWDDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKARGATLFACDLQQSSSGE
AKLRMCVAVKRKIQLYYWKDRDFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGTVKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTLEPRLLVQSVELQRPRFITSAGSNVVYVASNHFVWRLVPISI
ASQIRQLLQDKQFELALQLAKMKDDSDADKRQQIHHIQNLFAFNLYCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPFTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
MIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLNFLKDGFKELAIPYLEHIIYMWD
ETRPEFHNVLIQLYLEKVQGLMKVYLNSLPEGVPAVAAGKEAGELGEYRNKLLSFLEVSS
SYEPERLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTHMAEEYCHGHYDSSAN
GNKDVYLSLLRMYLSPPDVHFLGPIKMELCEPQANLQAALKVLQLHHSKLNTTKAINLLP
ANTQIREIQVFLESVLEEKAGRKRFDQVLKSLLQAEFLRVQEERIFHQQVKCVITDEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRSMCPAE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcatacgaaccagttcctatcctggagaaattacccctccagatcgactgt
ctggcggcctgggatgattggctccttgtggggaccaaaccaggccatctccttctgtac
aggatcaagaaagatgcaggtacaaacaggtttgaagttactttagagaaatccaataag
aacttctcaaagaagatccagcagctttttgtggtgtcgcagtacaagattttggttagt
ctgttggaaaataacatccacgttcacgacctgctcacgttccagcagataactgtggtg
tccaaagccagaggggccacactgtttgcctgtgacctgcagcagtccagctctggcgag
gccaaactgcgcatgtgtgttgccgtcaagaggaagattcagctgtattactggaaggac
agagatttccatgaattacagggggatttcgccgctccagacattcccaagtccatggct
tggtgtgagaactccatatgtgtgggtttcaaacgagactactatctgatccggatggac
ggacgtggcacagtcaaagaactgtttcccacagggaaacagctggaaccattggtggcc
ccgctggctgatgggaaggtcgcagtgggtcaggatgacctcacggttgttttaaacgaa
gaaggcgtctgcactcagaaatgtgcccttaactggacggacattcctgttgcaatggag
caccagccaccgtacatcatcgcagtgctgccacgctatgtggagatccgcacgcttgaa
cccagactgctggtgcagagcgtagaactgcagagaccgcgcttcatcacctccgctgga
tcaaatgtcgtgtacgtcgcgagcaatcattttgtttggcgtctggtgcccatctctata
gccagccagatacgacagctgctacaggacaaacagtttgaactggcacttcagctagcg
aaaatgaaggatgattcagatgcagacaagagacaacagatccatcacattcagaacctg
tttgccttcaacttgtactgtcagaaacgctttgacgactccatgcaggtgtttgctaag
ttaggcacagatcccactcatgttattggactgtatccagacctgcttccctctgactac
cgcaaacagctgcactaccccaaccctctgcccacactgtctggagccgagctggagaaa
gcccacctggccctcatagactacctgacacagaaacgcagtcatttagtgaagcagctg
aatgactcggaccccttcaccacctcccctctcatggaggggacccccaccatcaagagc
cgcaagaagctccttcagatcattgacaccactctgcttaaatgttacctccacaccaat
gtagctttggtgtcgcctctcctgcgtctggagaacaatcactgtcacatagaggagagc
gagtatgtgctgaagaaagcccacaaatacagcgaactcatcatcctctatgagaaaaaa
ggccttcaccagaaagctctgcaggttctgctggatcagtccactaaagccaactctcct
ctgaagggtcatgagaggactgtacagtatcttcagaggctgggtgtggagaacctgggc
atgatatttgagttttcaccgtgggttctgaagatttgtccagaggatggactgaagatc
ttcactgaggacctgacggaggtggagactctgcccagagataaagtgttgaatttcctg
aaggacggcttcaaggagcttgccatcccgtacctggagcacatcatttacatgtgggac
gagacacgccccgagttccacaatgttctgatccagctctacctggagaaggtgcaaggc
ctcatgaaagtgtacctcaactcactgcctgaaggtgttccagctgtagctgcaggaaag
gaggcaggagagctgggggagtacaggaacaagcttctgtcgtttctggaagtttccagc
agctatgagccagagagactcatcagtgatttcccatttgatggtctgttggaagagagg
gctcttctgctaggtcgtatggggaaacatgagcaggctctcttcatctatgttcacatt
ctgaaagacacgcatatggctgaagagtactgccacggtcattatgattcttcagcaaac
ggcaataaagacgtttatctgtccctgctccgcatgtatctgtctcctccggatgtgcac
ttcctcgggcctattaagatggagttatgtgagccacaggcgaacctccaggcggccctg
aaagttcttcagctccaccacagcaaactaaacaccaccaaagccataaacctgctgcca
gccaacacacagatccgagagatccaggtctttctggagagtgtgctagaggagaaggct
gggaggaagcgctttgaccaggtcctgaagagcctccttcaggccgagttcctgcgggtg
caggaggaacgcatctttcaccagcaggtgaagtgtgtcatcacagatgagaaaacctgc
agagtgtgcaagaagaagatcggaaacagtgcctttgccaggtatccaaacggtgtggtg
gttcactacttctgctgtaaagatcgcagcatgtgtccagcggagtaa
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integrated database retrieval system
