Sinocyclocheilus grahami (golden-line barbel): 107584157
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Entry
107584157 CDS
T04918
Symbol
colec12
Name
(RefSeq) collectin-12 isoform X1
KO
K10062
collectin sub-family member 12
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107584157 (colec12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107584157 (colec12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sgh04091
]
107584157 (colec12)
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Opsonins
107584157 (colec12)
Lectins [BR:
sgh04091
]
C-Type lectins
Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
Scavenger receptor with a CTLD (SRCL)
107584157 (colec12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
KASH_CCD
UL45
Diphtheria_T
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
107584157
NCBI-ProteinID:
XP_016126133
UniProt:
A0A672Q1Z4
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MKDDFTDEEEVQSFGYKRFGIQEGSECTKCKNDWALRVAIALLYVLCALLTIAVAVLGYK
VVQRMDNVTEGMENYGGKIMAVETDLKKLDDQTGEKSENATSELLSFKMEIQTLQKQLSD
VAVKASNNRAVLNELQLAGEDMQSGHHSLRDLLESNANVISKVNRTLNSYSGLIDGLKTD
TSRLQMDLQVQTSEKGRNTHSISTLNFTQTQQRNLISSIQRSVEDTSQAVQKLKNDYQSL
QQVARQTKVDADWLREKVQNLQALAANNSVLTRSNSDALEDVTSQLNSVSEQVQNASGIA
DSHEQSIRELMDQQRDHDNSTSLKFDALEAHLDRNEAEMDRITGNVSFTTQLLGVISVDL
NGLRTCSETVAQHSDLLLGLNSSVAETRADNTELKTQQEELAARLDKEVSSLSIIMEEMK
LVDSKHSQLITNFTILQGPPGPRGPRGDKGSQGPPGKAGQKGENGEKGAPGVAGPKGERG
PAGLSGVPGMKGPPGSRGSPGPKGSRGSGGRAGPSGEKGDPGIPGLPGRDGQPGPQGPQG
PQGLRGPAGPAGPAGLDGPRGPVGPIGPPGPPGLPGLPAPVVVSPVDPQGFVNRQVAPPP
TSTPGCPPQWKSFRDKCYYFSSESLNFDETKERCSNKSSTMLIINDEDEQLWIKRQISGK
GYFWLGLTDSADESIWRWVDGSLPNYTKWKPGQPDNWSHGHEAGEDCAGLIHEASWNDFF
CTERIGFICERTNESKVPVL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgacttcactgatgaagaggaagtgcagtcttttggctacaaaaggtttggt
atccaggaaggaagtgaatgcactaaatgtaaaaatgactgggccctgagggtggcgatt
gctcttctgtatgtactttgtgcactgctcaccatagctgtggctgtgcttggatacaaa
gtggtccaaagaatggataatgtaacagagggtatggagaattatggagggaagatcatg
gctgtagagacagacctcaagaaacttgatgatcaaacgggagagaagtcagaaaatgcc
accagtgaactcctgtcattcaagatggaaattcagacgttgcagaagcagctcagtgac
gttgctgtgaaggcttctaacaacagagctgttctcaatgagctacagctagccggcgag
gacatgcagagcggacatcactcactgcgagatctgttggagagcaatgccaatgtcatt
agcaaagtaaaccgcaccttaaactcatacagcggcttgattgacggactaaagacagac
acgtctcggctccagatggaccttcaggtgcagacgagcgaaaagggccgaaacacccac
agcatcagcactctgaacttcacccagacccagcagaggaacctcatcagctctatccag
aggtcggtggaggacactagccaggctgtccagaagcttaagaatgactatcagagcctt
cagcaggtggctaggcagaccaaagtggatgctgactggctgagggagaaggtccagaac
cttcaggccttagctgctaacaattctgtgctgactcgctctaacagtgatgctctggag
gacgtgacctctcagctgaactcagtctcagagcaggtccagaatgcctcgggcatcgcc
gacagccacgaacagagcatccgcgagctcatggaccagcagcgagaccacgacaattca
acctccttgaagtttgatgcactagaggcacatcttgaccgcaacgaggcggaaatggac
cgcataacggggaatgtaagcttcaccacgcagctactcggagtgatcagcgtggatctg
aatggtcttcgcacctgctccgagacagtggcccagcattcggacctgctactggggctg
aacagcagtgtggcagaaaccagagccgacaacacagagctcaaaacccaacaggaagaa
ctggccgctaggctcgacaaagaggtcagcagcctctccataatcatggaggaaatgaaa
ctggtcgacagcaaacactcgcagctcatcacgaatttcactatccttcagggtcctcca
ggtccaagaggtcctcggggagacaaagggtcccaggggccacctggcaaagctggccag
aaaggtgaaaatggtgaaaagggagcacctggtgttgctgggcctaaaggagaaaggggt
ccagcagggctttctggtgtaccaggaatgaaagggccacccggatcaagaggaagccct
gggccaaaaggttcacgaggatctgggggcagggcggggccttcgggagagaaaggtgac
cctggtatacctgggctgcctggaagagatggtcagccaggtcctcaaggaccacaaggg
ccgcaaggactcagagggccagctggaccagctgggcctgcaggactggatggaccccgt
gggcccgttggccccattggcccacctggacctcctggattaccaggacttcctgcacca
gtagttgtgtccccggtagatccacaaggctttgtcaaccgccaggtagcgccaccccct
acaagtacaccagggtgcccacctcagtggaagagcttcagagacaaatgttactacttc
tcatcagagagtctgaactttgatgaaacgaaggaaagatgcagcaacaagagttcaact
atgctgattatcaatgatgaagacgagcagctatggataaagaggcagatttctggaaag
ggctacttttggctgggcctcactgacagcgctgatgaaagcatctggagatgggtggac
gggagcctgcccaactatacgaaatggaagcctggacagcctgataactggagccatggt
cacgaggctggagaggactgtgcagggttaatacacgaggccagttggaacgactttttc
tgcacagaacgcattggtttcatttgtgaacgaacgaatgaatccaaagtaccagtttta
tag
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integrated database retrieval system
