Shewanella glacialimarina: FJ709_12650
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Entry
FJ709_12650 CDS
T07885
Name
(GenBank) mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_12650
Transporters [BR:
sgla02000
]
Other transporters
Pores ion channels [TC:
1
]
FJ709_12650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
UCX05260
LinkDB
All DBs
Position
complement(2910864..2911697)
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AA seq
277 aa
AA seq
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MENLDGLEALIKQAPEFIMAYGLKTLAALAMFFIGKYFAGVAKRLTDKVLTSRKVDQTVV
SFVSNLAWSVVFVFTIVATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVL
FRPCRVGDFIEAAGVAGVVDEITIFSTKLRTGDNKLITAPNSAIMNGTITNYSALEKRRI
DLVIGVGYTSDIAKTKKVLAEVLDNNEFVLKDPAYTIGLAELADSSINFVVRPWVSTGDY
WPARFQILEQIKNALDAAEIEIPFPQMDLHVKELAAS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttgacggtttagaagcgttaataaagcaagcaccagagtttattatggct
tatggacttaaaacattagctgctttggcgatgttttttattggtaagtattttgctggt
gtagcaaaacgcctcactgataaagtattaaccagtcgcaaagttgatcaaactgtagtg
tcatttgtgtcaaaccttgcatggtcagttgtatttgtattcaccattgtggctacatta
ggtcaaataggcgtgcaaaccgcttcactcgtagctgttattggtgctgcaggtttggct
gttggtttggcattacaggggtcactatctaactttgcctcaggcgtattaatggtatta
ttccgtccatgtcgtgtgggtgactttatcgaagccgcaggcgttgccggtgtagtagat
gagattactattttctcgactaagcttcgtacgggtgataataaacttatcactgcgcca
aactcagccattatgaatggcactattaccaattattcagcgcttgaaaagcgtcgtatc
gacttagtcatcggtgtgggctatacctctgatatcgcgaaaactaaaaaagtattggct
gaagtattagataacaatgaatttgtattaaaagatcctgcttacactattggtttagct
gagttagctgattcatcgattaacttcgttgttcgtccatgggtgagcacgggtgattac
tggccagcgcgttttcaaattttagagcaaatcaaaaatgcattagatgcagctgagatt
gaaataccatttccacaaatggatttacatgttaaagaattagcagcaagttaa
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