Streptomyces aurantiacus: GCM10017557_31550
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Entry
GCM10017557_31550 CDS
T07085
Name
(GenBank) RNA polymerase sigma factor ShbA
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sgm
Streptomyces aurantiacus
Brite
KEGG Orthology (KO) [BR:
sgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgm03021
]
GCM10017557_31550
Transcription machinery [BR:
sgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM10017557_31550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
HTH_16
Sigma70_ECF
HTH_23
GerE
Motif
Other DBs
NCBI-ProteinID:
BCL28296
UniProt:
A0A7G1P3D1
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All DBs
Position
complement(3742161..3742748)
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AA seq
195 aa
AA seq
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MRDDEAANPQGVIGALVHRAVEGDEQATHDLLAHVHPLAIRYCRTRLSRLPGDARHFVED
LAQEVCVAVLLALPRYKDTGRPFEAFVFAIAGHKVADLQRAAMRHPGSTAVPSDEMPERP
DDSLGPEERALLSSDAAWAKKLMANLPQIQRELLLLRIAVGLTAEETGQMLGMSPGAVRV
AQHRALSRLRALAEQ
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacgaggcggccaatccccaaggggtgattggtgcgctcgtccatcgtgcg
gtcgagggcgacgagcaggccacgcacgacctcctcgcccatgtccatccgctcgccatc
cgctactgccgtacgcgtctgtcccggctccccggtgacgcgcggcacttcgtggaggat
ttggcgcaggaggtgtgcgtcgcggtgctgctcgcactgccgcgctacaaggacaccggg
cgccccttcgaagccttcgtcttcgccatcgccgggcacaaggtggcggacctgcagcgg
gccgcgatgcgtcatcccggttcgaccgcggtgccgtcggacgagatgcccgagcggccg
gacgactcgctcggccccgaggagcgcgccctcctcagcagtgacgccgcgtgggcgaag
aaactcatggccaacctcccccagatccagcgggagctgctcctgctgaggatcgcggtg
ggtctcacggccgaggagaccggacagatgttgggaatgtcacccggcgcggtccgcgtg
gcccagcaccgggccctcagccggctccgggcgctggcggagcagtag
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