Scandinavium goeteborgense: A8O29_017425
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Entry
A8O29_017425 CDS
T06630
Name
(Genbank) OmpA family protein
Organism
sgoe
Scandinavium goeteborgense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
QKN82983
LinkDB
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Position
complement(3460115..3461812)
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AA seq
565 aa
AA seq
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MRNLSKPLLVALAFTLALWLVWGFWPLGLGSRLFLSAVVLVSAGGLGWRYWRQMQNTAES
VVDIALPPEDFEGALVLVCGAGDMLFSANETFRETRQGWYLPVRQPEQLAQIAESVASGR
PALVAQVSVLLAVVPERWQEEVAFSSQLHQWQRAIAQSRRAFAGLPPVWACLWLNAPAMS
DEERYRWFFLTNNREGIQVQENNGVAQSYLPWCTSAPEGLHSHRLDSSLWLESLFRWIKP
HVTDVMQTRHHDTPALPPCMLAVCSGPLATLPDNLWQQHAASVTTLQSRSVSTADIPPLP
DMLLPHLSRRHGISRLMLSWRVVGGIVGIFLLLAMLASWINNQRFIQNVSDHLALYQRLS
GNPPAPKVQAQEQLRSDNGLLDNWQRQGAPMRYTLGLYQGMRLIAPVRAAINNWAPPPPP
PPVINKIVQGPKTVRLDSMSLFDSGKSDLKPGSTKVLVNSLVGIKARPGWLIVVSGHTDN
TGTPQLNQTLSLKRAEAVRNWMRDTGDVPESCFAVQGYGETSPVATNDTAEGRALNRRVE
ISLVPQANACQVSGKSPASSQDDDV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatctgagcaaacccttgctggtcgcgctggcattcacgctggcgctctggctc
gtctggggattctggccgctgggcctcggtagccgcctttttctgagcgcggttgtcctc
gtgtcggcgggaggcctcggctggcgttactggcgtcaaatgcaaaatacggctgaaagc
gtggtggatatcgcgttgccgccggaggattttgaaggtgcgctggtgctggtgtgtgga
gctggcgacatgctgttctctgccaacgaaacgtttcgcgaaacacgtcagggttggtat
ctgcctgtacgtcagccggaacaactggcacaaattgctgagtctgtcgcatccgggcgc
ccggcgctggtggcacaggtttcagtcttgttggcggtggttcctgagcgctggcaggaa
gaggttgcattcagtagccagcttcatcagtggcagcgcgctattgcgcaatcacgccgg
gcatttgctggactgccgccggtatgggcctgcttatggctgaatgcgccagcgatgagc
gatgaagaacgataccgctggttttttctcaccaacaatcgtgaaggtattcaggttcag
gaaaacaacggggtcgcgcaatcttatctgccatggtgcacctctgcgccggaagggttg
cactcccatcgtctggatagctcgctgtggctggagtctctgtttcgctggattaaaccg
catgtgactgacgttatgcagacgcgtcaccacgatactcccgcgctgcctccctgcatg
ttagcggtttgcagcgggccgctggcgacgctgcctgacaatctctggcaacagcatgcc
gcctcggtcaccacgttgcagagtcgttcggtgtccacggcggatattccgccgctgccg
gatatgctgctgccgcatttatcacgccgccacggtatcagtcgcctgatgctttcctgg
cgcgttgtgggcggcattgtggggatctttttgctgctggcgatgctcgcctcgtggatc
aacaaccagcgttttatccagaacgtcagcgatcatctcgcactttaccaacgcctgagt
ggcaacccgccagccccgaaggtccaggctcaggaacaactgcgcagcgataacgggttg
ctggataactggcaacgccagggcgcgccgatgcgttacaccctcgggttgtatcaggga
atgcggctgattgcccctgtgcgagcggcgatcaacaactgggcaccaccgccaccgccg
cctccggttatcaataaaattgttcaagggccaaaaacggtccgcctcgacagcatgtcg
ttgttcgattccggcaaatctgacctcaaaccaggctcgaccaaagtgctggtgaattcg
ctggtgggcatcaaggccaggcctggctggctgattgtggtcagcgggcacaccgataat
accggcacgccgcaactgaaccagacgttatctctaaaacgcgccgaagcggtgcgcaac
tggatgcgtgataccggtgacgtgccggaaagttgttttgcggtacagggttatggcgaa
accagccctgtcgcaactaatgacacagcggaaggccgagcgctgaaccgtcgtgtcgaa
atcagtctggtaccacaggcaaatgcctgccaggtatcgggcaaatccccagcgtcatcg
caggatgatgacgtttaa
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