Streptomyces gardneri: H4W23_18325
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Entry
H4W23_18325 CDS
T07252
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sgx
Streptomyces gardneri
Pathway
sgx00550
Peptidoglycan biosynthesis
sgx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H4W23_18325 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sgx01002
]
H4W23_18325 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sgx01011
]
H4W23_18325 (dacB)
Enzymes [BR:
sgx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H4W23_18325 (dacB)
Peptidases and inhibitors [BR:
sgx01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
H4W23_18325 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sgx01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
H4W23_18325 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QPK46392
LinkDB
All DBs
Position
complement(4076322..4077809)
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AA seq
495 aa
AA seq
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MPEPRLWQLTAGSAALGLALAAVAVTAAGPWDSGQRTAERARAAAPATGGAHHAPPPPPA
KAEPHRPAPAPSAPGVLPALHAPATAGRPADLAATLVPLLADPGLGPLRTASVVDTATGT
QLYGEGAGTPMTPASTVKIATVAAALSALGPDHRIATTVAASADGRTVTLTGGGDPTLDP
ARLERLAADTARALKTRGHTSVRLAYDTSLYEGPELHPIGPNENLAPVTALMTREGRLDT
SGSGPAPRTADPAGDTATAFAALLTDAGIKVTGAPTKATEATEATEATGRPAEATAEAAT
PGAGPAPQAAPLARTYSAPLADLAERTLTLSDNDLAEALARQTALAHDLPASFEGAGQAV
RDELAGLDLPLTGARFADGSGLDRRDRVSAALLTALLTRAADPAHPTLRPVLTGLPVGGF
TGTLAGRFDTAPAAAGAGLVRAKTGTLTGVNTLAGTVVTADGRLLAFAFLAGRTLSPYEA
QPALDRLSAALAGRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagccgaggctgtggcagctcacggcgggctccgccgccctcggactggccctg
gccgccgtggcggtgaccgcagcaggcccgtgggactcgggccagcgtacggccgagcgg
gcccgcgccgccgcccccgcgacgggtggcgcacatcacgccccgcccccgccccccgcc
aaggccgagccccaccgccccgcgcccgcccccagcgcccccggcgtcctgcccgcgctc
cacgccccggccaccgccggccgccccgcggacctcgccgccaccctcgtaccgctcctc
gccgaccccggcctcggcccgctccgcacggcctccgtcgtcgacaccgccaccggcacc
cagctgtacggcgaaggcgccggcacccccatgacgcccgcctccaccgtcaagatcgcc
accgtcgccgccgcgctctccgccctcggccccgaccaccgcatcgccaccaccgtcgcc
gcctccgccgacggccgcaccgtcaccctcacaggcggcggcgaccccaccctcgacccg
gcccgcctcgaacgcctcgccgccgacaccgcccgcgccctcaagacccgcggccacacc
tccgtacggctcgcctacgacacgagcctctacgagggccccgagctccaccccatcgga
ccgaacgagaacctcgcccccgtcaccgccctcatgacccgcgaaggacgcctcgacacg
agcggcagcggccccgcgccccgcaccgccgacccggccggcgacaccgccaccgccttc
gccgccctcctcaccgacgccggcatcaaggtcaccggagccccgaccaaggccaccgag
gccaccgaggccaccgaggccaccggccggcccgccgaagccaccgccgaagccgccacc
cccggcgccggccccgccccgcaggccgcccccctcgcccgtacgtactccgcccccctc
gccgacctcgccgagcgcaccctcaccctcagcgacaacgacctcgccgaggccctcgcc
cggcagaccgccctcgcccacgacctgcccgcgagcttcgaaggcgccggccaggccgta
cgggacgaactcgccgggctcgacctccccctcaccggcgcccgcttcgccgacggcagc
ggactcgaccgccgcgaccgcgtctccgccgccctcctcaccgccctcctcacccgcgcg
gccgacccggcgcaccccaccctccgccccgtcctcaccggcctgcccgtcggcggcttc
accggcaccctcgccggccgcttcgacaccgcgcccgccgccgccggcgccggactcgtc
cgcgccaagaccggcaccctcacgggcgtcaacaccctcgccgggacggtcgtcaccgcc
gacggacgactcctcgccttcgcgttcctcgccggccgcaccctctccccgtacgaggca
cagcccgccctcgaccgactctccgccgccctcgccggccgacgctga
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