Streptomyces gardneri: H4W23_20420
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Entry
H4W23_20420 CDS
T07252
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sgx
Streptomyces gardneri
Pathway
sgx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4W23_20420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgx03019
]
H4W23_20420
Enzymes [BR:
sgx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
H4W23_20420
Messenger RNA biogenesis [BR:
sgx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H4W23_20420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QPK46756
LinkDB
All DBs
Position
4531325..4532767
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AA seq
480 aa
AA seq
DB search
MPNANEDTPTALSQVQRRAVSELLRVSPVADDLARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIVRPWADSVWEVGIAFGTVGSQKDGYQIEVTTYRSEAYDRTSRK
PEVSYGDSIDQDLVRRDFTVNAMAVALPEKEFIDPYGGLEDLAARVLRTPGTPEESFSDD
PLRMMRAARFAAQLDFEVAPEVVTAMREMSGRIEIVSAERVREELNKLLVSAHPRKGLGL
LVDTGLADHVIPELPALRLESDEHHRHKDVYEHSLTVLDQAIDLEEDGPDLVLRLAALLH
DIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMTALKYSNEMIKDVSRLVELHLRFHGYG
DGEWTDSAVRRYVRDAGPLLSRLHKLTRSDCTTRNKRKATALSRTYDGLEERIAQLQEQE
ELDAIRPDLDGNQIQEILGIGPGPAIGQAYKFLLELRLENGPMEHDQAIAALKEWWAARG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacaccccgaccgcactgagccaggtgcaacgccgcgcggtc
agcgaactgctgcgtgtgtcccctgtcgccgacgaccttgcccgccgcttccaagaggcc
gggttcagcctcgcgctggtcggtggctcggtacgggatgccctgctcggccggctcggc
aacgacctggacttcaccaccgacgcccgccccgaggacgttctgaagatcgttcgtccg
tgggccgactccgtctgggaggtcgggatcgccttcgggacggtcggctcgcagaaggac
ggctaccagatcgaggtcacgacgtaccgctccgaggcgtacgaccggacctcccggaag
cccgaggtctcctacggcgactccatcgaccaggacctcgtccggcgtgacttcaccgtc
aacgccatggccgtggccctccccgagaaggagttcatcgatccgtacggcggtctggag
gacctggccgcccgggtcctgcgtacgccgggaacgcccgaggagtccttctccgacgac
ccgctgcgcatgatgcgggccgcgcggttcgccgcccagctggacttcgaggtggcaccc
gaggtcgtcacggcgatgcgcgagatgtccggccggatcgagatcgtctccgccgagcgg
gtcagggaagagctcaacaagctgctggtctcggcgcacccccggaagggcctcggcctg
ctcgtggacacgggtctcgccgaccacgtcatccccgagctgcccgccctgcgcctggag
agcgacgagcaccaccgccacaaggacgtctacgagcactcgctgaccgtcctggaccag
gcgatcgacctggaggaggacggccctgacctggtgctgcgcctggctgccctgctccac
gacatcggcaagccgcgcacccgtcgcttcgagaaggacggccgggtctcgttccaccac
cacgaggtggtgggcgcgaagatgaccaagaagcgcatgaccgcgctgaagtactccaac
gaaatgatcaaggacgtctcgcggctggtcgagctgcaccttcgcttccacgggtacggg
gacggcgagtggaccgactcggcggtgcgccgctatgtccgcgacgcggggccgctgctc
tcgcggctgcacaagctgacccgttcggactgcaccacgcgcaacaagcgcaaggcgacg
gcgctgtcccgcacctatgacggcctggaggagcgcatcgcccagctccaggagcaggag
gagctggacgcgatccgtcccgacctggacggcaaccagatccaggagatcctcgggatc
gggcccggtccggccatcggtcaggcgtacaagttcctgctggagctccggctggagaac
gggccgatggagcacgaccaggcgatcgcggcgctcaaggagtggtgggccgcgcgcggc
tga
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