Strigops habroptila (Kakapo): 115612090
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Entry
115612090 CDS
T08851
Symbol
NGEF
Name
(RefSeq) ephexin-1 isoform X1
KO
K07525
neuronal guanine nucleotide exchange factor
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115612090 (NGEF)
Membrane trafficking [BR:
shab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115612090 (NGEF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
PH
SesA
SH3_16
Motif
Other DBs
NCBI-GeneID:
115612090
NCBI-ProteinID:
XP_030351819
LinkDB
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Position
8:9796848..9847952
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AA seq
743 aa
AA seq
DB search
MDGHGREAAHRLSSSGPWQDLSQQVLRESGSVSEGEEDSEDANPRTHERNTHYIAIQRNS
RYYRSMRLPSREKRKTSREAMHAGHATGSLKNNEPVKEPVKVLSHKGSPSPVSSDETTLD
ELWLQRLLPSYPRYRGNRPGSPSPAPLLPPPPPELLGSRLPPPAMELLAAALSAACALDQ
DGSAGQPGREPPAAAEESPAAATAPPPAHPMTADSWRNLIEHIGLLYQEYRDKSTRQEIE
TRRLQDSQTDPEESSPSEETPSEAEPTSTPESKAPPQISLLRNSNSRFNLWQDLPEIRSS
GVLSILQPDEIKLQEAMFELVTSEASYYKSLNLLVSHFMENERLKKILHPSEAHILFSNV
LDVMAVSERFLLDLEQRVEENIVISDVCDIVYQHTVNHFSVYITYVSNQTYQERAYKQLL
QDKPAFREVISQLELDPKCKGLSFSSFLILPFQRITRLKLLVQNILKKVEEKSDRENTAL
DAHKELETVVKACNEGVRKMSRTEQMISIQKKLEFKIKSVPIISHSRWLLKQGELQQMNG
PKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVFDSAPRGLLRVEELEDQGQSLA
NVFILRLLENADDREASYMLKASSQSEMKRWMISLAPNRRTKFVSFTSRLVDCPQIQCVH
PYVAQQPDELSLELADVLNILDKTDDGWIFGERLHDQERGWFPSSMGEEILNPKIRAQNL
KECFRVHKSDDSQRRKLGSRNRQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcatgggagagaagccgcacacaggctctcctccagcgggccctggcaggac
ctttctcagcaggtattgagagagtcaggttcagtctctgaaggtgaggaagactcagaa
gatgctaacccacggacccacgagaggaacacgcattacattgccattcaaagaaactcc
aggtactaccggtccatgaggctgccaagcagagagaagagaaagacttcaagagaagca
atgcacgcagggcatgctacaggttcactcaaaaacaacgaacccgtcaaagagcctgtg
aaggttctatctcataagggatcaccatctccagtgagctctgatgagacaacgttagac
gaactatggctgcaaaggctgctgccttcctacccccgttaccgtggcaaccgcccgggc
tcccccagccccgcgccgctgctgccgccgccgccgccggagctgctcggcagccgcctg
ccgccgccggccatggagctgctggccgcggccctcagcgccgcctgcgccctcgaccag
gacggctctgcgggacagcccggcagggagccccccgcggccgctgaggagagccccgcc
gcagccacggcgccgccgcctgcccaccccatgacggccgactcctggaggaacctcatc
gagcacatcgggctcttgtaccaggaatatcgagataaatctacacgccaggagattgaa
accagacgactgcaggattcacagacagacccggaggagagttcacccagcgaggaaact
ccatctgaagcagaacctaccagtacccctgaaagcaaagctccaccacaaatcagtttg
ctgaggaactccaactccaggttcaacttatggcaggatcttcctgagatccggagcagt
ggggtcctcagcatcctccagccagatgagatcaagctgcaggaggccatgtttgagctg
gttacttctgaagcctcctattacaaaagcctgaatctgctggtgtctcacttcatggag
aacgaacgtctgaagaagatcttacacccatctgaggcacacatcctcttctccaatgtc
ctggatgtcatggctgttagtgagcgcttcctgttggaccttgagcagcgggtggaggag
aacattgtcatctcggatgtgtgtgatatcgtctaccagcatacagttaaccacttctcc
gtgtacatcacctacgtctccaaccagacctaccaggagagagcttacaagcagctcctc
caggacaagccagctttccgagaagtgatctcacagctggagctggatcccaagtgcaaa
ggcctgtccttttcttccttcctcattctgccattccaaaggatcactcggctcaagctg
ctggtgcagaatattttgaagaaagtggaagagaagtctgacagggaaaacactgccctg
gacgcacataaagagctggaaacagtggtgaaagcatgtaatgaaggcgtcaggaagatg
agccgaacagagcagatgatcagcatccagaagaaactggaattcaagatcaagtctgtg
cccatcatctctcactcccgctggctgctgaagcagggggaactgcagcaaatgaatggt
ccaaaaacatcacgaacgcttcgcaccaagaaactcttcagagaaatctacttgttcctt
ttcaatgacctgctggtaatctgccggcaaattcctggggacaagtaccaagtgtttgac
tctgctccccgggggcttcttcgggtagaggagttagaagatcaggggcagagtttggcc
aacgtcttcatcttgaggctgctggagaacgcagatgaccgggaggccagctacatgctg
aaggcatcgtcccagagcgaaatgaagcgctggatgatctcactggccccgaaccgcaga
accaagtttgtttcatttacatccagacttgttgactgcccgcagatccagtgtgtccac
ccgtacgtggcccagcagccagatgagctgtccttggaactggctgacgtcctcaacatc
ctggacaagacagacgatggctggatatttggagagcgtcttcatgaccaggagaggggc
tggttccccagttctatgggggaggagatcctgaaccccaaaatccgagcccagaacttg
aaggagtgtttccgggtgcacaagtcggatgacagccagcggagaaaactgggcagcagg
aaccgccaatga
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