Sulfurospirillum halorespirans: SHALO_2726
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Entry
SHALO_2726 CDS
T04475
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
shal
Sulfurospirillum halorespirans
Pathway
shal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SHALO_2726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shal03019
]
SHALO_2726
03009 Ribosome biogenesis [BR:
shal03009
]
SHALO_2726
Enzymes [BR:
shal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SHALO_2726
Messenger RNA biogenesis [BR:
shal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SHALO_2726
Ribosome biogenesis [BR:
shal03009
]
Prokaryotic type
rRNA helicases
SHALO_2726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOO66484
UniProt:
A0A1D7TNI0
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All DBs
Position
2733703..2735529
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AA seq
608 aa
AA seq
DB search
MENNTPTPVTFESFGLHADILKAVVDAGFTEPSPVQAESIPLVLAGNDIVAQAQTGTGKT
AAFGLSTMSMLDPHLNKVQLLVITPTRELATQVSDELYSLGRFRGVKTVTIYGGSSYSRQ
IGLIEKGASVIVATPGRMLDLLKNGRLPGFSPKMVVLDEADEMLDMGFLEDIEEIFTYLP
KERQTLLFSATMPDPIKRLASKILNDPKFVSVTPKDHTTNEDIEQLYYVINEYERDDAMI
RLLDALEPEKSIVFCRTKKEVDRLSTQLMAVGHAAKGLHGDMEQNQRESVIKAFRGSQIE
ILVATDVAARGLNVADISHVFNYHMPFDPESYVHRIGRTGRAGKKGTAITLVTPIEFHSM
QRIGKKVGSKIEHRIVPSLRDVKENKLIKIAEDIKNAELNENAVKLLAILEEEMDMSQIA
LKLLSNLLKENTPIGPDKIGLDKKTLESVVKNIEERDGGRGGRSGGYRGNSGGGYRGNSG
GSRDGGGYRGNSGGSREGGGYRGTSSTGSRDGGGYKGSNPRDGGSRDAARPPRGDGVPRS
DSRGESRNPFAKEGSTSSAPREGGGYKGTRDSSDSRPPRAPRADRPAAPRSDAGRAPKTA
PRNAYKKD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacacacccacaccagtcacatttgagtcatttggcttacacgcagacatc
cttaaagccgtcgtagatgctggctttacagaaccaagccccgtccaagcagaatcaatc
ccgttagtcctagccggtaacgacatcgttgcacaagcacaaacaggtaccggtaaaacg
gctgcatttggtctttctacgatgagtatgctcgacccacaccttaacaaagtacaactt
ttagtcattacgccaacacgtgagcttgcaacgcaagtgagtgatgagctttactcatta
gggcgttttcgtggcgttaaaaccgtaacgatttacggtggtagctcatattcacgtcaa
attggcttgatcgaaaaaggtgcaagcgttatcgtagcaacaccgggtcgtatgttagac
cttcttaaaaacggtagactcccaggcttttcacctaaaatggttgttttggatgaagca
gatgagatgcttgatatgggcttcttagaagacatcgaagagatctttacctaccttcca
aaagagcgtcaaaccctgcttttctcagcaacaatgccagatcctatcaaacgtcttgcg
agcaaaattttaaatgacccaaaatttgtcagtgttacaccaaaagatcacacaacaaac
gaagacatcgaacaactttactacgtcatcaacgagtacgagagagatgatgcgatgatt
cgtcttttagatgctcttgagcctgagaaatccatcgtattctgccgtaccaaaaaagag
gttgacagactttcaacgcaactgatggcagtcggtcatgcagccaaagggttgcatggc
gatatggagcaaaatcaacgtgagagcgttattaaagcgttccgtggttcacaaatcgaa
atcttggttgcaaccgatgttgcagcacgtggtcttaacgttgctgacatcagccacgta
tttaactaccatatgccatttgatccagagagttatgttcaccgtatcggtagaaccgga
cgtgcgggtaaaaaaggtacagcgattacattggtaacgcctatcgagtttcactcaatg
cagagaattggtaaaaaagtaggctctaaaatcgagcacagaattgttccaagtttacga
gacgtcaaagagaacaaactgatcaaaattgccgaagatattaaaaatgcagagcttaat
gaaaatgctgtcaaacttcttgctattttggaagaagagatggatatgtcgcaaatcgcg
cttaaactgctctcaaaccttctcaaagaaaatacacctatcggccccgataaaatcggt
ttagataaaaagaccttagagtctgtggttaaaaacatcgaagagcgtgatggtggtcgt
ggcggcagaagtggcggttacagaggaaactctggcggtggctacagaggcaattcaggt
ggatcacgtgatggtggcggctatagaggaaactctggcggttcacgcgaaggcggcggt
tacagaggcacatcatcaacaggttcacgtgatggtggcggatacaaaggttcaaaccca
cgtgatggcggaagcagagatgctgcacgtcctccaagaggcgatggcgttccaagaagt
gatagcagaggcgagagtcgtaatccatttgcaaaagagggaagcacatcttccgctcca
cgcgaaggcggcggatacaaaggaacacgtgatagcagcgatagcagaccaccacgcgct
ccaagagccgatagaccagccgcaccacgtagtgatgcaggtcgcgctccaaaaaccgct
ccacgtaacgcttacaaaaaagactaa
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