Sphingomonas hankookensis: PPZ50_01830
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Entry
PPZ50_01830 CDS
T08811
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
shan
Sphingomonas hankookensis
Pathway
shan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PPZ50_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shan03400
]
PPZ50_01830
DNA repair and recombination proteins [BR:
shan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PPZ50_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
POR
Motif
Other DBs
NCBI-ProteinID:
WCP72327
LinkDB
All DBs
Position
complement(372963..373835)
Genome browser
AA seq
290 aa
AA seq
DB search
MTARAYWQGQIRLALVSIPVEIYSATKSGASISFRQIHEPSGKPIHYEKSVTGIGPVDPD
EIMKGYQLEKGEYVLLDQDEIDAVKLESKKTLELTQFVDAHEIDVIYYEKPYFVVPADDL
AEEAFVVLREALKRTKKVGLGQLALRGREYVVSLKPCGRGLVLETLRYADEVNRAQSYFR
DIPDARPDADLLDLAETLIAKKTAAFDPQEFHDRYVDALKDLIERKAKAKGRKIVDTDPN
EDRPSGGNVVDLMAALKKSLEKPAAKAPAKKTTPKKRAPAKKAATTRKRA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacggcacgcgcatattggcaggggcagattcgcctcgccctcgtatcgatcccggtc
gaaatctacagcgccaccaaatcgggggcgagcatcagctttcgccagattcacgaaccc
agcggcaagccgatccattacgagaaatcggtgaccggcatcggcccggtcgacccggac
gagatcatgaagggataccagctcgaaaagggcgaatatgtcctgctcgaccaggacgag
atcgacgcggtcaagctggagtcgaagaagacgctggagctgacccagttcgtcgacgcg
catgagatcgacgtgatctattacgagaaaccctatttcgtggtgcccgccgacgacctt
gccgaggaagcgttcgtcgtgctgcgcgaggcgttgaagcgcacgaagaaggtcgggctg
ggccagctggcgctgcgcggccgggaatatgtcgtcagcctgaagccgtgcgggcgcggg
ctggtgctggagacgctccgctatgccgacgaggtcaatcgcgcccagtcctatttccgc
gacattcccgatgccaggcccgatgccgatctgctcgacctggccgagacgctgatcgcc
aagaagaccgccgcgttcgacccgcaggagtttcacgaccgctatgtcgatgcgttgaag
gacctgatcgagcgcaaggccaaggcgaaggggcgtaagatcgtcgataccgaccccaac
gaagatcgaccgagcggcggcaatgtcgtcgacctgatggcggcgctcaagaaatcgctc
gagaagccggcggccaaggcaccggcgaagaagaccacgccgaagaagcgcgcaccggcg
aagaaggccgccacgacgcgcaagcgggcctga
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