Shewanella sp. JNE2: MZ182_08690
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Entry
MZ182_08690 CDS
T08546
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
shej
Shewanella sp. JNE2
Brite
KEGG Orthology (KO) [BR:
shej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shej03000
]
MZ182_08690 (hdfR)
Transcription factors [BR:
shej03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MZ182_08690 (hdfR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UPO32882
UniProt:
A0A9Q8SAL8
LinkDB
All DBs
Position
1939364..1940212
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AA seq
282 aa
AA seq
DB search
MDTDLLKTFLEVSRTRHFGKAAENLYLTRSAVSFRVKQLEGILGVALFERQRNNIQPTPA
GERMLGHAEAVLTAWERAKQDVSLSQLQSTQLAIGAGPNIWDAYLQGHLQDLHIGLPGVA
LRTEVLPLTVMTRQLMDRTLDIAISFDPPKLDQFELVQLGQINLLLVSSLADMAVDGVSS
GQYVKVDWGTAFNIIHAQEYAALPVPSLHTSSARIALDFILNNGGCAFLPEHLVQQLLHK
GELHLVHGANAISRSVYVAYWAENDRLEQIKQAITFLIDDGL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatactgatttactcaagacatttctcgaagtttcccgtactcgccatttcggcaag
gcggctgaaaatttgtatctcacgcgcagtgcggtgagttttcgcgttaagcagctcgaa
gggatacttggcgttgcgttgtttgaacggcaacgtaacaatattcaacctacgcctgcc
ggggagcgaatgttaggccacgccgaagccgtgttaaccgcgtgggagcgtgctaaacaa
gatgtctccttgagtcagttacaatcgactcaattggcaataggagcgggccccaatatt
tgggatgcgtaccttcaaggacatttgcaggatttgcatattggcttaccgggtgtcgct
ttgcgcacggaagtattgccactgacggtaatgactcggcaattgatggatagaacgctg
gatattgcgatttccttcgacccacccaaacttgatcaatttgagctagtgcaattagga
cagattaatttattgttggtgtccagcttggccgatatggctgtcgatggggtatcttct
gggcaatatgtaaaggtggattggggcacggcttttaatattatccatgcgcaggaatat
gccgcgttgcctgttcctagcctacataccagttctgcacgtattgccttagattttatt
ttaaataatggtggctgcgcatttttacccgaacatttagtgcagcagttactgcataaa
ggggagctacaccttgtacatggagccaatgccatttcccgtagcgtgtatgtagcctat
tgggctgaaaatgacaggttagagcagataaaacaggccatcacgtttcttattgatgat
gggctataa
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