Shewanella sp. FDAARGOS_354: CEQ32_08085
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Entry
CEQ32_08085 CDS
T04944
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_08085
Enzymes [BR:
shf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
CEQ32_08085
Transfer RNA biogenesis [BR:
shf03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
CEQ32_08085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ASF14962
LinkDB
All DBs
Position
complement(1786148..1786984)
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AA seq
278 aa
AA seq
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MNQDDIWLDIPESKQLNTDSDDVEAAPELHILYQDEHLVAIHKPAGLLVHRSYLARRERF
FAMQLTRDLVGCHVFPVHRLDRPTSGVLLFAKNSEVANALCEQFADHSIEKQYLALVRGN
MHESGVLDYALKVELDEVADKFSNQDKAAQEAVTQYEPLLNAEIPYPSGRYATSRFALVK
LSPKTGRKHQLRRHMAHLRHPIIGDTTHGDGKQNAFFRTHFDINRLWLIAKKLTFTHPIT
HERLSIETELEPEWETVFARLGWDDSALSSTPSILIAG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagatgatatctggttagatataccagagagtaagcaattgaataccgatagt
gatgatgtagaagccgcgcctgaactgcacattttatatcaagacgagcatctcgttgct
atccacaaacctgcgggattgctggtgcatcgcagttatttggcacgccgtgaacgtttt
tttgcgatgcaattaacacgcgatctggtggggtgtcatgtgtttccggtacatcgttta
gatagaccgacctctggcgtgttgttatttgccaaaaatagtgaagtggctaacgcgctt
tgcgaacaatttgccgaccatagtatcgaaaaacagtacctagcgttggtgcgtggcaat
atgcacgagagtggtgtattggattatgcgctcaaggtggaattggatgaagtggcggat
aagttctcaaatcaagataaagcagcccaagaagcggtgactcaatatgaaccgctactc
aatgctgaaatcccctatccgtcaggacgttatgcaacgagtcgatttgctttagttaaa
ctgagtcctaaaacggggcgcaagcatcaactaagacgccatatggcgcacttacgtcat
ccgattattggtgataccacccatggtgatggtaagcaaaatgcattttttagaacccat
tttgacatcaatcgactatggctgattgcgaaaaaattaaccttcactcacccgataacc
catgagcgcttaagcattgaaacagagcttgagcctgaatgggaaaccgtttttgctcgc
ctaggttgggatgatagcgcattatcttccacacccagcatattgattgcgggttaa
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