Shewanella halifaxensis: Shal_0422
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Entry
Shal_0422 CDS
T00654
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_0422
Enzymes [BR:
shl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
Shal_0422
Transfer RNA biogenesis [BR:
shl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Shal_0422
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Paralog
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GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ABZ74997
UniProt:
B0TQK4
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All DBs
Position
497250..497963
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AA seq
237 aa
AA seq
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MRPSNRTPAQSRPVTITRQFTAHAEGSVLVEFGDTKVLCTASFEEGVPRFLKGQGQGWVT
AEYGMLPRSTHSRMQREAARGKQSGRTQEIQRLIGRSLRAAVDMKLLGENTIVIDCDVIQ
ADGGTRTAAITGACVALVDALNWARGKGILKTNPLKFLIAAVSVGIYKGEPICDLEYIED
SAAETDMNVVMTETGKIIEIQGTAEGEPFSHEELLSLLELAKHGIREIVDIQKASLS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaagcaacagaactccagcacagtctcgccctgtgactattactcgccagttt
actgctcatgccgaaggttcggttttagtagaatttggtgacaccaaagtactgtgtaca
gctagttttgaagaaggcgtaccgcgtttccttaaaggccaaggccaaggttgggtaact
gctgaatatggtatgttgccacgttcaacgcatagccgtatgcagcgtgaagctgctcgc
ggtaagcagtctggtcgtactcaagaaattcaacgtctaattggccgctcactacgtgct
gcggtagacatgaagcttctaggcgaaaacaccattgttatcgactgtgatgtgattcag
gctgacggtggtacacgtaccgctgctatcactggtgcatgtgttgcgctcgttgacgcg
cttaactgggctcgtggtaaaggcatcttgaagactaacccacttaagttccttattgct
gcggtaagtgttggtatctataagggcgagccaatctgcgatttagaatatatcgaagac
agcgctgctgaaactgacatgaacgtggtaatgactgagaccggtaagattatcgagatc
cagggtactgcagaaggtgagccgttcagccacgaagagctattgagccttctagaattg
gctaagcacggtattcgcgagatcgttgatatccagaaagcttcgttaagctaa
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