Shewanella halifaxensis: Shal_3638
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Entry
Shal_3638 CDS
T00654
Name
(GenBank) protein of unknown function UPF0079
KO
K06925
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_3638
Transfer RNA biogenesis [BR:
shl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Shal_3638
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TsaE
RNA_helicase
Zeta_toxin
AAA_22
nSTAND3
NACHT
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
ABZ78179
UniProt:
B0TU68
LinkDB
All DBs
Position
complement(4435638..4436120)
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AA seq
160 aa
AA seq
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MNTQSMILNLNDEQETVDLGTKLAGLITPPLTVYLSGDLGAGKTTFSRGLIQSLGHQGAV
KSPTYTLVEPYELDALDVYHFDLYRLYDPEELEFMGIRDYFTSRSLCIVEWPDRGHGLLP
PADIHIHIKYVNTGRQVELQALSSEGEKILAALNHNDNKQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgcaatcaatgatattaaatttaaatgatgaacaagaaacagtagatttaggg
acaaagcttgcaggtcttattactcctcctttaactgtttatttaagcggcgatcttggt
gcgggtaagacgacctttagccgtggacttattcaaagtttagggcatcaaggagcagta
aagagcccgacctataccttggtagaaccctatgagttagatgcgttagacgtgtatcat
ttcgatctctatcgtttatatgatcctgaagaattagagtttatggggatccgtgattac
tttacctcgcgcagcttatgtatcgtagagtggcctgatcgcggccatggtttattaccc
cctgctgatatacatatccatattaaatatgttaatactggacgacaagtcgagttacag
gcgctttcttctgaaggtgaaaaaatattagcggccctaaatcataatgataataaacag
taa
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integrated database retrieval system
