Shewanella sp. MR-7: Shewmr7_3566
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Entry
Shewmr7_3566 CDS
T00389
Name
(GenBank) protein of unknown function DUF853, NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_3566
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Shewmr7_3566
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
TrwB_AAD_bind
AAA_16
AAA_10
AAA_30
T2SSE
AAA_25
CbiA
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABI44546
UniProt:
Q0HQQ9
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Position
4230159..4231652
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AA seq
497 aa
AA seq
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MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFITDIKGD
ISGLGVAGTPNDKLFQRAAEIGIEEYQTEANPVVFWDLAGEQGHPLRTTVSEMGPTLLGR
ILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVADERKDISAKYGLISAQSLAA
IQRSVLGLERDGGKDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPNLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQ
FPDDIPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVPNPKLVVSEVISQLAVGEAL
VSTLAEKGVPTMVERALIAPPRCRMGPASAEELNAIRAKSPIGGKYDTLINRESAYERLN
QRHAEAANGAASTKTANTPAAQEAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGK
QILRGLLGGILGKSTRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgaatactctactcttaggtaaaggtgagcaacaggttcacttaaatcttaaatatgcc
aaccgccacggactgatcgcaggcgccactgggacgggtaaaaccgtttcgctgatgacc
ctcgccgaaggcttctcccgccaaggtgtgccggtatttatcaccgacattaaaggcgat
atttctgggcttggcgtcgcgggcacaccaaacgacaaactcttccagcgagccgccgaa
atcgggattgaggaatatcaaaccgaggccaatccggtggttttctgggatttggcagga
gagcaagggcatcccttacgcacaaccgtgagcgagatggggcccaccctgctcgggcgc
attctcgaactcaatgacacccaaagcagtattttagacatagtgtttcaactggctgac
gaccaaggtttattgttactggatctcgacgatcttcgcgccatgctgaacttagtcgcc
gatgagcgcaaagatatctccgccaaatatgggcttattagcgcccagtccctcgctgcc
attcaacgttcggtcctcggcttagagcgcgatggcggcaaagactttttcggcgagcca
gcgctacaactcgaagacttgatgcgcacaaacttacaagggcgcggcattatcaacctg
ttagccgccaataagttaatcctgacccctaacctctactccagcttcttactctggctg
ctatcggaactctttgaaaacctacccgaagtcggcgatctcgataaacccaagttagtc
ttctttattgatgaggcgcacttattgtttgaaggctgcccagcaagtttgcttaaacgc
atagagcagattatgcggcttatccgctccaagggcgtcggggtgtatttttgctcgcag
tttcctgacgatattcccaacgagatcttaggtcagctcggtaatcggattcagcatgcc
ctcagggcgtacacccctagggatcaaaaagccgttaaaactgcggcagagacctttgtg
cccaaccctaaattggtggtcagcgaggtaatttcacaactcgccgtgggcgaagcttta
gtctcgacactcgccgagaaaggtgtgcccactatggtggaacgcgccctgattgcaccg
ccccgctgtcgcatggggccagcaagcgcggaggagttaaacgccattcgagccaagagc
cccatcggcggcaagtacgacaccttaatcaaccgagagtccgcctacgaacggctcaat
caacggcacgccgaagcggccaatggcgcagctagcaccaaaaccgcgaatacgcccgcc
gcccaagaggcggaacagggctggtttagcgaactgatcttcggcaataaacgccgccaa
ggattggccgagacactctccaaacaagcggcgcgaaccgtgggtaatcaactcggcaaa
caaatattgcgcggattactcggcggcatactcggcaagtcgacccgcaggtaa
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