Shigella sp. PAMC 28760: A0259_19375
Help
Entry
A0259_19375 CDS
T04390
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
shq
Shigella sp. PAMC 28760
Pathway
shq00053
Ascorbate and aldarate metabolism
shq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
A0259_19375 (garD)
Enzymes [BR:
shq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
A0259_19375 (garD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
AMR24658
LinkDB
All DBs
Position
3921602..3923173
Genome browser
AA seq
523 aa
AA seq
DB search
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI
PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI
VSLQDEKHVGFQSMVEDILQVAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcgaaatcagacaagaaacgccaactgcgttttatataaaagttcacgac
acagataatgtggcaattattgttaatgataatggcctgaaagcaggaacgcgttttccg
gatgggctggaattaattgaacatattccccaggggcataaagtcgcattgctcgacatt
ccggctaatggtgaaattattcgttatggcgaagtgattggttacgccgtgcgtgcaatc
ccacgcggaagctggatcgacgaatcaatggttgtactaccggaagcgccgccgttacac
acgctgccactggcaaccaaagtcccggaacccttaccgccgctggaaggatacaccttt
gagggctatcgcaatgccgatggcagcgtgggcaccaaaaacctgctcggcatcaccacc
agcgtccactgtgtggcaggcgtggtggactacgtagtaaaaatcattgaacgcgatctg
ctaccgaaatacccgaacgtcgatggcgtggtggggctgaatcatttgtacggttgtggc
gtggcgattaacgcaccggcggcagttgtgcctattcgtaccattcacaatatttcgctg
aaccctaactttggcggcgaagtaatggtgattggcctgggttgtgaaaagttgcagcct
gagcgcctgctgactggaacggatgatgtgcaagctattccagtagaaagcgccagcatt
gtcagtttgcaggatgaaaagcatgtcggttttcagtccatggtcgaggatattttgcag
gtcgccgaacgccatctacaaaaactgaatcaacgtcagcgagaaacctgtccggcttca
gaactggttgtcggcatgcagtgcggtggcagcgatgccttttctggcgtaacggcaaac
ccggcggttggctatgcgtctgatctactggtgcgctgcggcgcaacggtgatgttctca
gaagtcacggaagtgcgtgacgcgatccatctgctgacaccacgcgcagtgaacgaagag
gtcggcaaacggctgctggaggagatggagtggtacgataactatctcaatatgggaaaa
accgaccgcagcgccaacccttcgccgggcaacaagaaaggcggtctggcaaatgtagtg
gagaaagcgctcggctccattgctaaatcgggtaaaagtgcaattgttgaagtgctgtcg
cccggtcaacgcccgactaaacgcggattaatttacgccgcgacgccagccagcgatttt
gtctgtggcacgcaacaggtggcttcgggtatcaccgtgcaagtgtttacgaccggtcgt
ggtacgccgtacggcctgatggcggtacccgtcattaaaatggcgacccgcaccgagctg
gcgaaccgctggtttgatttaatggatattaacgcgggcactatcgccaccggcgaagaa
accattgaagaggtgggctggaagttgttccactttattctcgacgtcgccagcgggaag
aagaaaaccttctcggatcaatggggactgcataaccagctggcggtgtttaacccggca
ccggtgacctga
DBGET
integrated database retrieval system
