Sarcophilus harrisii (Tasmanian devil): 100916232
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Entry
100916232 CDS
T02286
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03420
Nucleotide excision repair
shr04115
p53 signaling pathway
shr04120
Ubiquitin mediated proteolysis
shr05161
Hepatitis B
shr05169
Epstein-Barr virus infection
shr05200
Pathways in cancer
shr05202
Transcriptional misregulation in cancer
shr05210
Colorectal cancer
shr05212
Pancreatic cancer
shr05213
Endometrial cancer
shr05214
Glioma
shr05216
Thyroid cancer
shr05217
Basal cell carcinoma
shr05218
Melanoma
shr05220
Chronic myeloid leukemia
shr05222
Small cell lung cancer
shr05223
Non-small cell lung cancer
shr05224
Breast cancer
shr05225
Hepatocellular carcinoma
shr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100916232 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
100916232 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100916232 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100916232 (DDB2)
05202 Transcriptional misregulation in cancer
100916232 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
100916232 (DDB2)
05212 Pancreatic cancer
100916232 (DDB2)
05225 Hepatocellular carcinoma
100916232 (DDB2)
05226 Gastric cancer
100916232 (DDB2)
05214 Glioma
100916232 (DDB2)
05216 Thyroid cancer
100916232 (DDB2)
05220 Chronic myeloid leukemia
100916232 (DDB2)
05217 Basal cell carcinoma
100916232 (DDB2)
05218 Melanoma
100916232 (DDB2)
05213 Endometrial cancer
100916232 (DDB2)
05224 Breast cancer
100916232 (DDB2)
05222 Small cell lung cancer
100916232 (DDB2)
05223 Non-small cell lung cancer
100916232 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
100916232 (DDB2)
05169 Epstein-Barr virus infection
100916232 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
100916232 (DDB2)
03400 DNA repair and recombination proteins [BR:
shr03400
]
100916232 (DDB2)
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100916232 (DDB2)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
100916232 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
100916232
NCBI-ProteinID:
XP_031799818
Ensembl:
ENSSHAG00000017108
UniProt:
G3WXL2
LinkDB
All DBs
Position
6:232893764..232906360
Genome browser
AA seq
454 aa
AA seq
DB search
MAPKRPAGLGKRSAPAPEPPTAKRRCVRTTGRRGRPPARGSGKGDGAGVGWKQRALIGQR
ESPYSIIWALHQHILGAPQPSFHQCLQKVFLHSLGSYRLFRTASPFDRRTTCLEWHPTHP
STLAVGSKGGDIILWDYEVLDKTYFIKGIGAGGSITSMKFNPLNTNQLFISSVAGTTSLK
DFLGNTITVFTSTNTWDYWYTSVDVSVKSRVVATGDSMGNVILLNMDGKEIWNLRLHKKK
VTHVSLNPLCDWLLATASVDQTVKIWDLRQIRGKSSFLHWMPHERAVSAAYFSPDGTKLL
TTDQHSEIRVYSASHWACPQHLIAHPHRHFQHLTPIKATWHPRFDLIVVGRYPDPNFAGF
TPHEPRTIDVFDGNSGKMACQLYDPDCSGIISLNKFNPIGDTLASAMGYNILIWSPQEVV
RRKQEGLMKAMNEHGLGRGRSVHQPSPRNRPGQN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcccccaagcgtccggcgggcctcggcaagaggagcgcccccgccccggagcctccc
acggccaagaggcggtgtgtgcggaccacgggccgcagaggccggccgccagcccggggc
tctggcaaaggggatggtgctggggtaggctggaaacagcgtgcattgattggtcagagg
gaatccccttatagcatcatttgggctctgcaccaacatatcctgggagctcctcagcca
tcattccatcagtgtcttcagaaggtctttttgcactctctgggatcttaccgacttttc
cgcacagccagtccctttgatcggagaacaacctgcctggaatggcacccaactcacccc
agcactctggctgtgggctctaagggaggagacatcatcctttgggactatgaagtactg
gataaaacctacttcattaaagggattggagctggaggcagcatcacaagcatgaagttt
aaccctctcaataccaatcagctgttcatttcctcagtggcgggtaccaccagcctcaag
gacttcctgggcaacacaattacagtctttaccagcacaaacacctgggactactggtac
actagtgtggatgtgtctgtcaaaagtcgtgtggtggccactggagatagtatgggcaac
gtgatcttgctgaacatggacggcaaagagatctggaatctcaggctccacaaaaagaag
gtgacccatgtgtctttgaatcctctctgtgactggctgctggccacagcctcggtggac
cagacggtgaaaatctgggacctgcgccagatcagagggaagtcgtccttcctccactgg
atgcctcatgagcgtgctgtcagtgcagcttatttcagtccagacgggaccaaactcctg
accacagaccagcacagcgagatccgggtgtattctgcctcccactgggcatgcccccag
catctcattgctcacccgcatcgccacttccagcacctcacgcccatcaaggcaacgtgg
catccccgttttgacctcatcgtggtgggccgctatccagaccccaactttgcaggattc
acccctcatgagcctcggacaattgatgtatttgatggaaactcagggaagatggcgtgc
cagctttatgacccagactgctctggcatcatctcgctaaacaagtttaatcccatcggg
gacaccctggcctctgcgatgggttacaacattctcatctggagcccccaggaggttgtg
cgcaggaagcaggaggggctgatgaaggcaatgaatgagcacggtctggggaggggccgc
tcggttcaccagccctcccctcggaaccgaccgggccagaactag
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