Sarcophilus harrisii (Tasmanian devil): 100917468
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Entry
100917468 CDS
T02286
Name
(RefSeq) protocadherin alpha-3-like
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Sde0182_C
Cadherin_C_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
100917468
NCBI-ProteinID:
XP_012406642
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Position
2:373705690..373709740
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AA seq
840 aa
AA seq
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MIRIFPQIFAMVFSERKSLGTRQLLLSFILHTVWEVGSGQIHYSVSEEAKHGTFVGRIAQ
DLGLEVGELVSRLFRVVSKGPRDYLEVNAQNGILFVNSRIDREELCGRSPVCSIHLEVIV
DKPLQVFHVEVEIKDINDNPPRFSVKQKNLSIAESRLVDSQFPLEGASDADIGVNALLIY
RLSPNEYFTLDIKNEEEIKLALKKQLDREETPELHLLLTVTDGGKPELTGTVRLLVTVLD
VNDNAPEFDKTVYKVKLLENASSGTPVIQLNATDLDEGLNSQITYSFTSDISPDVEAKFH
IDPVSGVINVKGHVDFEEIKLYKIQVEATDRGSPQLAGHCRVMVEILDTNDNTPEVVVTS
LSLPVREDAPPGTVIALISVSDRDAGANGQVTCSLYPQGPFTLVSTFKNYYSLVLEGPID
RESTSAYELVVTARDGGTPALWTTSSLSVGIDDVNDNAPTFEQLVYTVFVKENNPPGCHI
FTVSASDPDAQENALVSYSLVERRVGERPLSSYVSVHSESGKVYALQPLDHEELELLQFQ
VSARDAGFPPLGNNVSLQVFVLDENDNAPTVLPPHANGGSANELISQSVAVGHVVAKIRA
VDADSGYNAWLSYELLSKMGVGSNAFRVGLYTGEISTTRDLEESDSRKQTLLVLVKDHGE
PMLSATATVIVSIVEGGLSTKTFSGVSRSSASAVSGKDTVLVDVNVYLIIAICSVSSLLV
LSLLLYVLLRCVPQRGEYGNGKPMLVCSSGTESWSHSQQRGQKGFSGEGAAKNDLMAFSP
NFPPCPGSVHKGEQKEATANSSDQVGYLRYFVCDNTNLDIVKLVFHDDCFLLHYLVVLVD
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatatttccccaaatatttgcgatggtgttcagcgagagaaaaagcctgggg
acccggcagctgctcctctcatttattcttcacacagtctgggaggtggggagcggccag
atccattactcggtgtctgaagaagcgaaacacggtacgttcgtggggcgcatcgcgcag
gatctgggtctggaggtcggggagctggtgtcgcggctgttccgcgttgtgtccaagggc
cccagagactacctggaggtaaatgcgcagaacggcattttgtttgtgaattcgcggatc
gaccgtgaggagctgtgcggccgcagccctgtttgtagcattcatctggaggtgatcgtg
gacaaaccgctgcaggtttttcacgtggaggtggagatcaaggacattaatgacaacccg
cctcggttctctgtaaaacaaaagaatctgagtattgcagaatcgaggttagttgactct
cagtttccgctagagggcgcgtcagatgcagatatcggagtcaatgctcttttaatttat
aggctcagtcccaatgagtatttcactctagatataaaaaacgaggaggaaattaaactt
gcattaaaaaaacaactagacagagaagaaactccagaacttcacttattgcttacagtc
actgatgggggcaaaccagaactaactggaacagttcggctactggttacagtgctggat
gtcaacgataatgcccccgaatttgacaaaacagtctacaaagtgaaattactagaaaat
gcatccagcggaactccagtaattcaactaaatgctacagatttagatgaaggattaaac
agtcaaattacttattcattcacaagtgatatttctccagatgtagaggccaagttccat
atagacccagtaagtggagttataaatgtaaagggacatgttgatttcgaggaaattaaa
ttatataaaattcaagtagaagccactgacagggggtctcctcagttggctggtcattgc
agggtcatggtagaaattctggacaccaatgataatacccctgaagtagtggtgacatcg
ttgtcactaccagtccgagaggatgcccctccaggtacagtcattgctctcatcagcgtg
tccgatagagatgcaggagccaatggacaagtaacttgctctctgtacccccagggaccg
ttcacgttagtgtccactttcaaaaattactactccctagttttggaaggccctatagac
cgagaaagcacgtcggcctatgagctagtggtaactgcgagggatggtggaacgccagca
ctatggaccacttccagcttgtcagtgggcattgacgacgtgaatgacaatgcacctacc
tttgagcagctcgtgtatacagtgtttgtaaaggagaacaatccgccgggttgtcacatc
ttcacagtatcagcctcagacccggatgcacaggaaaacgctctcgtatcttattcactg
gtagaacggcgagtaggggagcgcccgctgtcgagctacgtgtctgtgcactcggagagc
gggaaagtgtacgctttgcagcccctagaccacgaggaactggagctactgcaattccag
gtgagtgcccgggatgcaggttttcctcctttaggcaacaacgtgagcctccaggtattc
gtgctggatgagaacgacaatgcaccaacggtgctgccgcctcatgcgaatgggggctca
gcgaacgaattgatatcacagtctgtggctgtgggtcatgtagtggcaaaaatccgggct
gttgacgcagattcaggctataatgcatggctgtcttatgaactgttgtccaagatgggc
gttgggagcaatgctttccgcgtaggtctgtacactggcgaaatcagcaccactcgagat
ttggaagaatcagactcaagaaaacagacgttactagttctggtgaaagaccacggtgaa
cctatgttgtctgccacagctactgtcatcgtgtcgatagtggaaggtggattatctacg
aagaccttttctggggtgtccaggtcttctgcttctgcagtctctgggaaggacacagtt
ctggtagatgtgaatgtatatctgatcattgctatctgttcggtatccagtcttttggta
ctcagcctgcttctgtatgtattgctgcgttgtgtaccccaaaggggtgagtacggaaat
ggaaaacctatgctggtgtgctctagtgggacagagagctggtcgcattcccagcagcgg
ggccagaaaggtttttccggggaaggggcggccaagaatgacctcatggcttttagtccg
aactttcctccttgtcctggctctgtgcataaaggggaacagaaggaagcaactgcaaat
tcatctgaccaggtgggttatttgagatattttgtctgtgacaatactaacttggatatt
gtgaagcttgtttttcatgatgattgttttctcctacattatttggttgtcttggtagat
tga
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