KEGG   Sarcophilus harrisii (Tasmanian devil): 100924142
Entry
100924142         CDS       T02286                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013  Nucleocytoplasmic transport
shr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100924142 (CASC3)
   03015 mRNA surveillance pathway
    100924142 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shr03019]
    100924142 (CASC3)
Messenger RNA biogenesis [BR:shr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100924142 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 100924142
NCBI-ProteinID: XP_031822080
Ensembl: ENSSHAG00000013338
LinkDB
Position
4:335189050..335202645
AA seq 699 aa
MADRRRQRASQDTEDEESGASGSDSAGSRGGGGGGGGPGGGSSSSLRGGRSGGLNSRRAE
GGGLRSPEESECESEDCIEGDAVLSDYESAEDSEGEEEYSEEESSKVELKSEANDAANSL
VKEDKGEEKPDPKGTVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKG
LFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRS
AHNPDDIKPRRIRKPRFGSSPQREPNWANDRPNKPPRHQGSGGSSLPPRTFINRNAAGTG
RMPTSRNFSRAGGYKEGRTGFRSTENGGPHSIRSNDSAKHENGYRSRRLEYIEDGDLSPE
MESSHVLGSPEKEEAASEPPPPTPETVPPPPDRPVEKKSYSRARRSRNKAGDASKLAEEV
PPPVEGPAPAPPPPATTPPTPSKTGNWEAPVDSSTGELEQDMTQLNLTEQNWSPGQPQFL
QPRELRGIPNHMHLGAGPPPQFNRMEEMSVQGSRAKRYSSQRQRPVPEPPAPPVHISIME
GHYYDPLQFQGPIYTHSDSPTPMPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPV
SMSPGQPPPQQLLAPTYFSAPGVMNFGSPSYPYTPGALPPPPPPHLYPNTQAQSQVYGGV
TYYNPVQQQVQPKPSPPRRTSQPVTIKPPPPEVVSRGSS
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggcggaccgacgacggcagcgcgcctcgcaggacacggaggatgaggagtccggagcc
tcgggctcagacagcgccggttcccggggcgggggcggcggaggcggcgggcccggcgga
ggctcctcgtcctcgctgcgcggcggcaggtccggaggcctcaactcgcggcgagcggag
ggaggcggtctccggagtcccgaagagtccgagtgtgaaagtgaagactgcatagaaggc
gatgctgttctctcagattatgaaagtgcagaggattcagaaggagaggaagaatacagt
gaagaggaaagttccaaggtggagctgaaatcagaagctaatgatgctgctaattctttg
gtaaaagaagacaaaggagaagaaaagcctgatccaaaaggaactgtgactggcgagaga
caaagtggagatgggcaagaaagcacagaacctgtagaaaacaaggtgggtaaaaaggtc
ccaaagcatttggatgatgatgaagatcggaagaaccctgcctacatccccaggaaaggg
ctcttctttgaacatgacctccgaggccaaacccaagaagaagaagtcagacccaaagga
cgtcagcggaagctgtggaaggatgagggtcgctgggagcatgacaagttcagagaggat
gaacaagcacccaagtctcggcaggagctcattgccctgtatggttatgatattcgatca
gctcacaaccctgatgatatcaaaccccggagaatccgtaaacctaggtttggaagctct
ccacagagagaacctaactgggccaatgaccggccaaacaagcctcctcgtcaccagggc
tctgggggatcctctttgcccccaagaacattcattaatcgtaatgctgctggtacaggc
agaatgcctacatctagaaacttctctcgagcagggggctacaaagaaggaaggaccggg
tttaggtctacagaaaatggagggccacatagtattcgttctaatgactctgccaagcat
gaaaatggttatcgttctcggcgcctggagtacattgaagatggggatctgtcccctgaa
atggagtcttcccatgtgcttggcagccccgaaaaagaggaagcagcttcagagcctcct
ccccctactcctgaaactgtaccaccacccccagacagaccagttgaaaagaagtcctac
tctcgtgcaagaagatccagaaacaaagctggagatgcaagcaagttggcagaggaagtg
ccacctcctgtggaggggccagcccctgcacctccacctcctgcaaccacccccccaaca
ccttcaaagactggaaattgggaagccccagtagattccagcacgggagaacttgagcaa
gatatgacccaactgaatctgacagaacaaaattggagcccagggcagcctcaatttcta
caaccaagggagcttcgaggtattcccaaccacatgcacctgggagcaggccctccacct
cagtttaaccgtatggaagaaatgagtgttcagggtagtcgagccaaacgatattcatcc
cagcgtcagagacctgtccctgaaccaccggccccacctgtacacattagtatcatggaa
gggcactactatgacccattgcagttccagggaccaatctacacccacagtgacagccct
accccgatgcctcctcaaggcatgattgtacaaccagaaatgcacctcccccaccccggt
ttacatccccatcagacgccagcacctctacctaaccccggtctgtaccccccaccagtg
tccatgtccccaggacagccaccaccccagcaactgcttgcccctacctacttctccgct
ccaggtgtcatgaacttcggcagtcccagctatccctataccccaggggcactgccccct
cccccacctcctcacctataccctaacacccaggctcagtctcaggtgtatggaggagta
acctattacaacccagtccagcaacaggtgcagccgaaaccatctccacctaggcggaca
tcccagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttccagttaa

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