Sarcophilus harrisii (Tasmanian devil): 100929247
Help
Entry
100929247 CDS
T02286
Symbol
PLXNB2
Name
(RefSeq) LOW QUALITY PROTEIN: plexin-B2
KO
K06821
plexin B
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100929247 (PLXNB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
RasGAP
Peptidase_S64
Motif
Other DBs
NCBI-GeneID:
100929247
NCBI-ProteinID:
XP_012405849
Ensembl:
ENSSHAG00000010107
LinkDB
All DBs
Position
5:complement(6888464..6943109)
Genome browser
AA seq
1865 aa
AA seq
DB search
MWGRPVPRSRMVSWVWVLTLTSSLWHVGDNSRSRKLETFRSKTELNHLVVDDVSGTVYVG
SVNALYQLTPDLQLVHAVETGPALDNKKCTPPIEPSQCQEAVDTDNVNKLLLLDRPGGRL
VECGSLFKGICALRELGNISHRIFYEDXGEKSFVASNDERVSTVGLVTSVGKGDDDSGPA
ERVLFVGKGNGPHDNGIIISTRLLDRKDGKEAFEAYTDHTAFKAGYLSANTQQFVAVFED
GDYVFFIFNQQDKQPAKNRTLVARMCKNDPFYYSYFEMDLECHSGSGEVYGVCHAAFVAT
LEASPGAGRVLFAVFSKDSKGGSGSPRSALCLFPLGDIHQKMEENRNKCYTGAQGSSSQT
FYKPFHGEVQCVSHGPASLSFRCGSEHLPYPLGSRDGLVSTATLQRDGMNLTAVTVTTEN
GHTVVLLGTSDGRILKVFLTADGTSTEYGSIPVELNKRIERDLLLSANGTSLYVMTQDKV
FRLPVQECLLYQTCDQCQESRDPYCGWCVLEDRCTRKIDCLRAKEENHWLWSRGNSCVAV
TSAQPQNMSRRAQGEVRLTVSPLPALTINDSLQCRFGDSPAHPARVEGDTIICDSPSSIP
KTPPGQDHVEVQIMLTFLRTPVFLTSHMYPFYDCKEAMSLAENIPCISCASNRWNCQWDL
KYHECRESSPNPEEGIIKSHMEENCPQFLNPSPLVIPMNYETTVNFEGKNLDPVKMPSLH
AGSEKLKFETSVTTGGSGTFTFTTPKLSYDGNETLPLNLYIKSYGKNIDSRLEVTLYNCS
FGRSDCSLCLAANPAYHCVWCGSQNQCVYEALCSNITTECPPPVITKIEPETGPLGGGIR
VTILGSNLGIQADDVKRITVAGKDCAFQKAQYSVSTRIVCEVDASKEPITGGIEVDINGK
LGQSPPHVQFTYQQPVPMEVKPTQGPQAGGTTLVISGSYLDTGSSEDVRVILGTLKKGVP
CQVIEFGPQIRCVTGPYEALGEVPIEVLYGNSSTAGNRVTFTYRENPVLKAFEPLRSFVS
GGRNINITGQGFDLIQNFSMVVIAEPLRSWSKRRKRQALSPLQAMTVVGTTYTRYSDTKV
VFSSPQVPDEPEAYNITTLLQMDGHRVLLKTEAGAFEYVPDPTFENFTDGVKKQVNKLIH
ARGTNLNKAMTIHEAEAFVGAERCFMKTLTETDLYCEPPEVQPPPKRRQKRDTTHNLPEF
IVKFGAREWVLGRVEYDTRMGDMPLSIILPLVIIPMVAIIAFSIYCYWRKSQQAEREYEK
IKSQLEGLEESVRDRCKKEFTDLMIEMEDQTNDVHEAGIPVLDYKTYTDRVFFLPSKDGD
KDVMITGKLDIPESRRQTVEQALNQFSNLLNSKSFLINFIHTLENQREFSARAKVYFASL
LTVALHGKLEYYTDIMRTLFLELMEQYVVAKNPKLMLRRSETVVERMLSNWMSICLYQYL
KDTAGEPLYKLFKAIKHQVEKGPVDAVQRKAKYTLNDTGLLGDDVEYIPLTVNVIVQEEG
VDAIPVKVLNCDTITQVKEKIIDQVYRTLPCSRWPKAESVVLEWRPGSTAQILSDLDLTS
QRDGRWKRINTLMHYNVRDGATLILSKMGISQQPEDSQQDLPGERHALLEEENRVWHLVR
PTDEVEEGKSKRGSMKEKERTKAITEIYLTRLLSVKGTLQQFVDNFFHSVLTPSPTVPPA
VKYFFDFLDEQAEKHEIKDEDTIHIWKTNSLPLRFWVNILKNPHFIFDVHVPEVVDSSLS
VIAQTFMDACTRTEHKLSRDSPSNKLLYAKEISTYKKMVEDYYRGIRQMVQVSDQDMNTH
LAEISRAHTDSLNTLVALHQLYQYTQKYYDEIINALEGDPAAQKMQLAFRLQQIAAALEN
KVTDL
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagaccggtcccgaggagcaggatggtgtcctgggtgtgggtgctgaccttg
acgagttccctgtggcacgtgggcgacaactcaaggtcccgaaaactagaaaccttccgc
agtaaaacggagttgaaccacctggtggttgatgacgtgtcggggactgtgtacgtgggg
tccgtaaatgccctctaccagctcacccctgacctccagctggtccacgcggtggaaacg
gggcccgcgctggacaacaaaaaatgcacgccccccatcgagccgagccagtgccaggag
gccgtggacacggacaacgtcaacaagctgctcctgctggaccggccgggcgggcggctg
gtggagtgcggcagcctcttcaagggcatctgcgccctgagggagctgggcaacatctcc
catcgcatcttctacgaggacnnaggggaaaagtcctttgtggccagcaacgacgagcgg
gtgtccacggtggggcttgtgaccagcgtgggcaagggcgacgacgacagcgggcccgcc
gagcgcgtgctcttcgtgggcaaaggcaacgggccccacgacaacgggatcatcatcagc
acgcggctgctggaccgcaaggatggcaaggaggccttcgaggcttacacggaccacacg
gccttcaaggcaggctacctgtcggccaacacgcagcagtttgtggccgtgttcgaggac
ggggactacgtcttcttcatcttcaaccagcaggacaagcagccggccaagaaccgcacc
ctcgtggcgcggatgtgcaagaacgaccccttctactactcctacttcgagatggacctg
gagtgccacagcggctcgggggaagtgtacggcgtctgccatgccgcctttgtggccact
ctggaggcctcacccggcgccggccgcgtgctcttcgcggtcttcagcaaggacagcaag
ggcggcagcggcagcccccgctccgccctgtgcctcttccccctgggggacatccaccag
aagatggaggagaacaggaacaaatgctacacgggggcccagggcagcagctcccagacc
ttctacaagcccttccatggggaagtccagtgtgtgagccacgggccggccagcctgagt
ttccgctgtggctctgagcacctgccgtaccccctcgggagccgggacgggctggtgagc
accgctaccctgcagagggacggcatgaatctgacggcggtgacggtgacgaccgaaaat
gggcacacggtggtcttactggggacatcggacggccgcatactcaaggtgttcctgact
gctgacgggacgtccacggagtacggttcgatccctgtggagcttaacaagcgcatcgag
agagacctgctgctgtccgccaatgggaccagtctctacgttatgacccaggacaaggtt
ttccggcttcctgttcaggagtgcctcctttaccagacctgtgatcagtgccaggaatct
cgggacccctactgcggctggtgtgtgcttgaggaccgctgcaccaggaagatcgactgc
ctgagggccaaggaggagaatcactggctctggagtcgggggaactcttgtgtggccgtt
accagcgcccagccccagaacatgagccgtcgggctcagggtgaggtgcgtttgacagtc
agcccgctcccagctctgacaataaacgacagccttcagtgtcgcttcggagactcgccg
gctcaccctgcccgtgtagaaggagacaccatcatctgtgactcccccagcagcattccc
aaaacgcctccgggccaagaccacgtcgaggtccagatcatgctcaccttcctgcggacc
cccgtgttcctgacctctcatatgtacccattctatgactgtaaggaggccatgagtctg
gcagagaatattccgtgcatctcttgtgccagcaatcgctggaactgccagtgggacctg
aagtaccacgagtgcagagagtcttcccccaaccctgaggagggcatcatcaaatcccac
atggaggagaactgtccccagttcctgaaccccagcccgctggtcatccccatgaactac
gagacaactgtgaactttgaggggaagaatctagatccagtgaagatgccatccctgcac
gctggcagtgagaagctgaaatttgaaacgtcagtgaccaccggagggtcaggcaccttc
accttcacgacccccaagttatcttatgatgggaacgagacgctgcctctgaatttgtac
atcaagtcctatgggaagaacattgacagcagattggaggtgaccctgtacaactgctcc
ttcggccgtagtgactgcagcctctgcctggccgccaaccccgcctatcactgtgtgtgg
tgtgggagccagaatcagtgtgtgtatgaggccctgtgcagcaatatcaccactgagtgc
ccaccccctgtcatcaccaagattgaacccgagacgggccccctgggtggcggcattcgg
gtcaccatcctgggctctaatctgggcatccaagctgatgacgtcaagaggatcacggtg
gctggcaaggactgtgcttttcagaaggcccaatattccgtgtccaccagaattgtatgc
gaggtggacgcttccaaagagcccatcacaggggggattgaggtggacatcaatgggaag
ctgggccagtcacctccccacgtccagtttacctaccagcaaccagtgcccatggaggtg
aagcccacccaggggccccaggccggcgggaccactctggtcatcagcggctcctacctg
gacaccggctcctctgaggacgtccgggtgatcctgggcaccctcaagaagggtgtgccc
tgccaggtcatcgaatttgggccccaaatccgatgtgtcacagggccctatgaggccctc
ggggaggtccccattgaggtcctctacggcaactcctcgacagcggggaaccgagtcacc
ttcacttaccgggagaaccctgtgctgaaggcctttgagcccctgcggagttttgtcagt
ggaggacggaacatcaacatcacaggccagggatttgacctgatccagaacttctccatg
gtggtaattgcagagccgctccgatcctggagcaagaggaggaagagacaggctctgagc
cccctccaggccatgacggtggtggggaccacgtatacccggtacagtgacaccaaagtt
gtcttctcgtccccccaagtccccgatgagcctgaggcctacaacatcaccacgctgctc
cagatggacggccaccgtgtcctgctgaagacggaggcgggggcttttgagtatgtcccg
gaccccaccttcgagaacttcactgacggagtcaagaagcaggtcaacaagctcatccat
gccaggggcaccaacttgaataaggcaatgaccatccacgaggcagaggcgtttgtggga
gccgagcgatgtttcatgaagacgctgactgagaccgacctgtactgtgaaccccctgag
gtccagccaccccccaaacggcgccagaagcgggacaccacccacaacttgcccgagttc
attgtgaaatttggcgctcgggagtgggtcctcggccgggtggagtatgacacgcggatg
ggtgacatgcccctcagcatcatcctgcccttggtgatcatccccatggtggccatcatc
gcgttctccatctattgctactggcgcaagagtcaacaggctgaacgcgagtatgagaaa
atcaaatctcagctggaaggcctggaggaaagtgtccgagaccgctgcaagaaggaattc
accgatctgatgatcgagatggaagaccagaccaatgacgtgcacgaggccggaatcccc
gtgttggattataagacctacacggaccgggtcttcttcctgccctccaaggatggtgac
aaggacgtcatgatcacggggaagctggacatccccgagtctcgcaggcaaacagtggag
caggctctcaaccagttctccaatctgctcaacagcaaatccttcctcatcaatttcatc
cacaccctggagaaccagcgggaattctccgcccgggccaaggtatactttgcgtccctg
ctaacggtggctcttcacgggaaacttgagtactacacagatatcatgaggacgctcttc
ttggagctcatggagcagtatgtggtggccaagaaccccaagctgatgctgaggaggtca
gagactgtcgtggagagaatgctgtccaactggatgtccatctgtctgtaccagtatctc
aaggacaccgctggtgaaccgctctacaagctcttcaaggccattaagcaccaagtggag
aagggccccgtggacgccgtgcagaggaaagccaagtacaccctgaatgacacggggctt
ctgggggacgacgtggagtacatcccactgaccgtgaacgttattgttcaggaggaaggt
gtagacgctattcctgtcaaagtcctcaactgtgataccatcacccaagtcaaggagaag
atcattgaccaagtgtaccgcaccttaccctgctccaggtggcccaaggccgagagcgtt
gtcctggagtggcgtcctggatccacggcccagatcctgagcgacttagatctcacctca
cagcgtgacggccgctggaaacgcatcaatacgctcatgcactacaacgttcgcgatggg
gccacgcttatcctttccaagatggggatctcgcagcagcctgaggacagccagcaggac
ctgcccggcgagcgccatgccctcctggaggaggagaacagagtatggcacctggtgagg
cccacggacgaggtggaagaagggaagtccaagaggggcagcatgaaggagaaggagagg
accaaggccatcacggagatctacctgacccgcctgctgtctgtgaagggcacgctgcag
cagttcgtggataacttcttccacagcgtcctgacccccagcccaacggtcccacctgcc
gtcaaatacttctttgacttcctggatgagcaggcggagaaacacgagatcaaggatgag
gacaccatccacatctggaaaaccaacagtttacccctccgattctgggtgaacatcctg
aagaaccctcacttcatctttgacgtccacgtcccggaggttgtggactcctccttgtcc
gtcatcgctcagactttcatggatgcctgcacccggacggagcacaagctgagcagggat
tctcccagtaacaaactgctctatgccaaagagatttctacctacaagaagatggtggag
gattactaccgagggattcggcagatggtccaagtgagcgaccaggacatgaacacccac
ttagctgagatttcccgggcacacaccgactccctgaacacccttgtagccttgcatcag
ctgtaccagtatacacagaaatactacgatgagatcatcaacgccctggagggggatcct
gcagcccagaagatgcagctggccttccgtctgcagcagatcgcggcggcgctggagaat
aaggtcacggacctctga
DBGET
integrated database retrieval system
