Sphingobium xenophagum: CJD35_00680
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Entry
CJD35_00680 CDS
T05146
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
shyd
Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shyd03021
]
CJD35_00680 (rpoH)
Transcription machinery [BR:
shyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJD35_00680 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
Sigma70_r3
HTH_11
Virulence_fact
Motif
Other DBs
NCBI-ProteinID:
ASY43134
UniProt:
A0A249MPL8
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All DBs
Position
I:131030..131944
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AA seq
304 aa
AA seq
DB search
MAKTSNVPAVPALGGEASLNRYLSEIRKFPLLTPEQEYMLAKRYEEHQDPEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEADRGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTASQKKLFFNLRRMKNNIEAFEDGDLKPEDVTKIATDLGVSEQDVVSMN
RRMAMGGDTSLNVPMREDGDGQWQDWLQDTDPLQDERVAEEQERTQRHEMLVEAMTDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDKLSHMAR
FAAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggccaagacgagcaatgtccccgcggttccggcgctgggcggtgaagccagcctcaac
cgctatctgtcggaaatccgcaaatttccgcttctgacccctgagcaggaatatatgctc
gccaaacggtatgaggagcatcaggaccctgaggctgcggcccagctggtgacctcgcat
ctgcgcctcgtggcgaagatcgcgatgggttatcgcggctatggcctgccggtcagcgaa
ctgatctccgaaggcaatatcggcctgatgcagggcgtgaagaagtttgaggctgaccgc
ggcttccgcctggcgacctacgccatgtggtggattcgcgcctcgatccaggaattcatc
ctgcgcagctggtcgcttgtgaaaatgggcaccaccgcatcgcagaagaagctgtttttc
aaccttcgccggatgaagaacaatatcgaagcgttcgaggatggcgatctgaagccggaa
gatgtgaccaagatcgcgaccgatctgggcgtgtccgagcaggatgtcgtgtcgatgaac
cgccgcatggcgatgggtggcgatacgtcgctcaacgtccccatgcgggaggatggcgac
ggccagtggcaggattggttgcaggataccgatccgttgcaggacgagcgcgtggccgag
gagcaggaacgcactcagcgccacgaaatgctggtcgaggcgatgacggacctcaacgat
cgcgaaaagcacatcctggccgaacggcgtctggccgaagaacccaagacgctggaggaa
ctgagtcaggtctatggggtatcgcgcgagcgcgtccgccagatcgaggtgcgcgccttt
gaaaagctgcaaaaggcgatgatgcgcattgccggtgacaagctcagccacatggcgcgc
ttcgccgccgcctga
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