KEGG   Sphingobium xenophagum: CJD35_05990
Entry
CJD35_05990       CDS       T05146                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
shyd  Sphingobium xenophagum
Brite
KEGG Orthology (KO) [BR:shyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shyd03400]
    CJD35_05990
Enzymes [BR:shyd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CJD35_05990
    5.6.2.6  RNA 3'-5' helicase
     CJD35_05990
DNA repair and recombination proteins [BR:shyd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CJD35_05990
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII T4SS-DNA_transf
Other DBs
NCBI-ProteinID: ASY44054
UniProt: A0A249MS87
LinkDB
Position
I:1239712..1242177
AA seq 821 aa
MRDLDEGGDTGPAPPYIAVMDILPPVLEQWFAARDWTPRVHQRAMLAAARRGDHALLVAP
TGAGKTLAGFLPTLTDLIEQPTDRLHTLYVSPLKALAVDVRRNLLTPIEEMALPIRVETR
TGDTPSDRKARQRIKPPHILLTTPESLSLLLSYPDAALMFADLQTVIVDEVHAFATQKRG
DLLSLSMARLQRINPGLRRVALSATVADVDAYRAWLAPDGDIDTVATVLGEAGAEPNVTI
LIPQGRVPWSGHSGKYAANQVMAEIAAHQTTLVFCNTRGLAELIFQELWSANDANLPIAI
HHGSLSIEARRKVESAMADGKLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIG
RANHRLDQASEAILIPGNRFEYLEARAALDAVEAGERDADDFRAGSLDVLAQHVMGLACA
GPFREEDMLAEIQSATPYSALTPDAFASVLHFIEGGGYALRAYDRFKRLTHDPDGNWRVS
HPRFIQQHRLNAGIIVDQPALAVRFANGRKLGTVEEGFAAQLTPGDSFFFSGMALEVVRM
DTSDLIVRATSKQARIPSWGGTRMAMSTRLAERVRTFLAQPDQWHRVPPDVREWLDMQKL
RSVLPQPGQLLIETFPHEGRHYLLCYSFEGWNAHQSLGMLLTRRMDAQGLMPLGFVSNDY
ALAIYGLKPVTDPKSLFSADILDHEFIDWVEQSSLLKRAFRDVAVISGLIERQHPGKRKT
GRQVTFSTDLIYDVLRKYQPDHLLLKAAWADARARMTDVGRLGDLIDRAATTMLHVSLDR
VSPLAVPVLILIGREQVAQSAAEDALLMEAEALVNTAMRAD
NT seq 2466 nt   +upstreamnt  +downstreamnt
ttgcgcgacttggacgaaggcggtgacaccgggccagcgcctccctacatcgctgtcatg
gacatcctccccccggtgctggagcaatggtttgccgcgcgcgactggacgccgcgcgtc
catcagcgcgccatgctcgccgccgcgcgccggggcgatcatgcgctgctggtcgccccc
accggcgcgggcaagacgctggccgggtttctgccgacgctcactgacctcatcgaacag
ccgaccgatcggctgcacaccctctatgtctccccgctcaaggcgctggcggtcgatgtc
cgccgcaatctcctgaccccgatcgaggagatggcgctgccgatccgcgtcgaaacccgc
accggcgacacgccatcggaccgcaaggcgcgccagcggatcaagccgccgcacatattg
ctgaccacgcccgaatcgctctcgctgctgctcagctatcccgatgcggcgctgatgttc
gcggatctgcaaacggtcatcgtcgacgaagtccatgcctttgccacgcaaaagcgcggc
gacctgctcagcctgtcgatggcgcggctccagaggatcaatcccggcctgcgccgcgtc
gccctgtccgcgaccgtcgcggatgtcgacgcctaccgggcctggctcgcgcccgatggc
gatatcgacacggttgccacggtgctgggcgaagccggcgcggagccgaacgtcaccatc
ctcatcccgcaagggcgcgtcccctggtcgggccattcgggcaaatatgcggccaatcag
gtcatggcggaaatcgccgcgcaccagacgaccttggtattctgcaacacgcgcggcttg
gccgaactcatctttcaggaattatggtcggcgaacgacgccaatctgcccatcgccatc
caccatggcagcctgtcgatcgaggcgcggcgcaaggtggaaagcgccatggccgacggc
aagctgcgcgcgcttgtcgccaccgcctcgctcgaccttggcgtcgactggggcaatgtc
gattgcgtgatccagatgggcgcgcccaagggatcgtcccgcctgctgcaacgcataggc
cgcgccaaccaccggctcgatcaggcgagcgaggccatcctgatccccggcaaccgcttt
gaatatctcgaagcccgcgcggcgctcgacgctgttgaagcgggcgaacgcgacgccgat
gattttcgcgcgggcagcctcgacgtgctggcccagcatgtcatgggcctcgcctgcgcc
gggccgttccgtgaagaggacatgctggccgaaatccagtccgcaacgccctatagcgca
ttgacgcccgacgccttcgcctccgtcctccatttcatcgaaggcggcggctacgccctg
cgcgcctatgaccggttcaagcggctgacgcacgatcctgatggcaactggcgcgtgtcc
cacccgcgtttcattcagcagcatcgcctgaatgcgggcatcatcgtcgatcagccagcg
ctcgccgtccgcttcgccaatggccgcaagctcggcacggtggaggaggggttcgccgcc
cagcttacccccggcgacagcttcttcttttccggcatggcgctggaagtcgtcaggatg
gacaccagcgacctgatcgtgcgggcgacctccaaacaggcccgcatccccagctggggc
ggcacccgcatggccatgtccacgcgccttgccgaaagggtccgcacgtttctggcacag
cccgatcaatggcaccgcgtcccgccggacgtgcgcgaatggctcgacatgcagaaactg
cgctccgtcctgccgcaaccgggtcagctgctcatcgaaaccttcccgcacgaagggcgt
cattatctgctctgctatagtttcgaaggctggaatgcccatcagtcgctgggcatgttg
ctgacccggcggatggatgcccaggggttgatgccgctgggcttcgtttccaatgactat
gcgctggccatctatggcctgaagcctgtcactgatcccaaaagcctgttttccgccgac
attctcgaccatgaatttatcgactgggtcgaacagtcgagcctgctcaagcgcgctttc
cgcgacgtcgccgtcatatccggcctgatcgagcggcagcatccgggcaagcgcaagacc
gggcggcaagtcaccttttcgaccgatctcatctacgacgtgctgcgcaaatatcagccc
gaccacctgctgctgaaggccgcttgggccgatgcgcgtgcgcgcatgaccgatgtgggg
cggctgggcgacctgatcgatcgtgcggccacgaccatgttgcatgtcagccttgaccgg
gtcagtccgctcgccgtcccggtgctgatcctcatcggtcgcgagcaggtcgcgcaaagc
gcggcggaggacgcgctgctgatggaggcggaggcgctggtcaatacagccatgcgcgcg
gattag

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