Shinella sp. HZN7: shn_34365
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Entry
shn_34365 CDS
T04278
Name
(GenBank) LuxR family transcriptional regulator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
shz
Shinella sp. HZN7
Pathway
shz02020
Two-component system
shz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
shn_34365
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
shn_34365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shz03000
]
shn_34365
Transcription factors [BR:
shz03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
shn_34365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
HTH_38
HTH_28
Terminase_5
WIYLD
Motif
Other DBs
NCBI-ProteinID:
ANH09199
UniProt:
A0A1A9GFT9
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Position
pShin-11:74473..75273
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AA seq
266 aa
AA seq
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MLDRIEIIRHQFARHQTLEGRIDHAFEAMKALGFGAMIYDYTPVPMGPNGHIAIPSLMKL
RNIASGMQEYWCDRGYFLIDPVQLLAARTSVPFFWNYEPGADTRIRRFVTSKTEPVARYL
LDNDMPAGVTVPIHMPHGGYATVTGTLAQGATAADALHNIADFGLLAQVFHEAAYPAYAD
TVPGPASIRLTAREQQCLLYCADGYSAKEISRLIGRSVPTVVLHLSTATRKLGARNRVQA
AAMAVRYGLLGPTEAPPPHAGTAARN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccggattgagatcatcaggcaccagttcgcccggcaccagaccctcgagggc
cgcatcgaccatgccttcgaggccatgaaggcgctcggcttcggcgcgatgatctatgac
tatacgccggttcccatgggtcccaatggccatatcgccatcccgtccctgatgaaactg
cgcaacatcgccagcggcatgcaggaatactggtgcgaccgcggctatttcctcatcgat
ccggtgcaattgctcgccgcacgcacatcggtgcccttcttctggaactacgagccgggg
gccgatacgcgcattcgtcgcttcgtgacctcaaagaccgaaccggtggcgcgctatctg
ctcgacaatgacatgccggccggcgtaaccgtgcccatccatatgccgcatggcggctat
gccacggtgaccggcacgctggcgcagggcgctaccgccgccgatgcattgcacaacatt
gccgacttcggtctcctcgcccaggtcttccacgaggccgcgtacccggcctatgccgat
accgtgccgggccctgcatcgatccgtctcacggcgcgggaacagcaatgcctgctctac
tgtgccgacggctattcggccaaggagatttcgcgcctcatcggccgctccgtgccgacg
gtcgtcctccatctcagcacggcgacaaggaagctgggcgcgcgcaaccgcgtccaggcg
gccgcgatggcggtgcgctacggcctgctcggcccgaccgaagcgccccctccccatgcg
ggcacagccgcaagaaattga
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