Ruegeria pomeroyi: SPO0834
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Entry
SPO0834 CDS
T00215
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00630
Glyoxylate and dicarboxylate metabolism
sil00680
Methane metabolism
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO0834
09102 Energy metabolism
00680 Methane metabolism
SPO0834
Enzymes [BR:
sil01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SPO0834
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_9
Fer4_10
Fer4_8
Fer4
Fer4_21
Fer4_17
Fer2
Fer4_6
Fer4_4
Fer4_16
Fer4_2
Fer4_18
FeoA
Spt4
Motif
Other DBs
NCBI-ProteinID:
AAV94139
UniProt:
Q5LV68
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All DBs
Position
868807..871584
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AA seq
925 aa
AA seq
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MADGAHVEMVSFTLNGEEVTVPEGLTIWEAAHGRGLVIPHLCHKPDPGYRPDGNCRACMV
EVAGERTLVASCIRPVAEGMVVTTDSARAEGARKMVVELLLADQPEVAHDASSHFHAMAG
LNGVSESRFPAKTPDSVPLLDASHVAMRVNLDACINCNLCVRACREVQVNDVIGMAGRGA
GAQVVFDQNDPMGASTCVACGECVQACPTGALMPATVLDAEQAGDSKDYDREVTSVCPFC
GVGCQLSFKVKDNKIKYVTGVDGPANESRLCVKGRFGFDYIDHPHRLTKPLIRRADAPKG
LNVDPGNPLSHFREASWEEALDFAARGLADLRAQKGSYVAGFGSAKCSNEEAYLFQKLIR
QGFGHNNVDHCTRLCHASSVSALLENVGSGAVTATFNEIENADVAIVIGCNPIENHPVAA
TYFKQFTKRGGKLIVCDPRGVGMGRFATHRLQFKPGADVSMLNAMMHVIVEEGLYDQAYI
DQFTENWEEMKAHLADYSPEKMEPICGIAAGELRDAARTFAAGKAGMIFWGMGVSQHIHG
TDNSRCLISLALMTGNVGKPGAGLHPLRGQNNVQGASDAGLIPMFLPDYQSVTDDGVRSA
FTSVWNSGDFSNQKGLTVVEIMHAIHDGDIRGMYILGENPAMSDPDVDHARAALAMLEHL
VVQDIFLTETANYADVILPASAWAEKTGTVTNTNRQVQMGRPAVAPPGQAKEDWWIEVEL
ARRLGLDWNYSHPSEVFAEMKRNMKSLDNITWARLEGEAVTYPSLSPEDPGQAIVFGDGF
PRANKRARFTPAKIVEPDERPDADYPFVLITGRQLEHWHTGSMTRRASVLDAVEPEANCS
MHPATLRAMGIEPGDMIRLTTRRGSVQVMVRADRAIAQDNVFLPFAYVEAAANILTNAAL
DPYGKIPEFKYAAVKVEKAEALAAE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgcacatgtcgagatggtgagctttaccctcaacggcgaagaggtcacc
gtgcccgaggggctgaccatctgggaggccgcccatggccgcggcctggtgatcccgcat
ctctgccacaagcccgacccgggctatcgcccggacggcaattgccgcgcctgcatggtc
gaggtcgcgggcgagcgcacgctggtggcctcctgcatccggccggtggccgagggcatg
gtggtcaccaccgacagcgcccgcgccgagggtgcccgcaagatggtggtcgagctgttg
ctggccgaccagcccgaggtggcgcatgacgcctcgagccatttccacgccatggccggt
ctgaacggggtcagcgagagccgctttccggccaagacgcccgacagcgtgccgcttctg
gatgccagccacgtggcgatgcgggtcaatctggatgcctgcatcaactgcaatctctgc
gtgcgcgcctgccgcgaggtgcaggtcaatgacgtgatcggcatggccgggcgcggcgcc
ggggcgcaggtggtgttcgaccagaacgacccgatgggcgcctcgacctgcgtggcctgc
ggcgaatgcgtgcaggcctgcccgaccggcgcgctgatgccggcgaccgtgctcgatgcg
gagcaggccggcgacagcaaggattacgaccgcgaggtgacctcggtctgcccgttctgc
ggggtgggctgccagctgagcttcaaggtcaaggacaacaagatcaaatatgtgaccggc
gtcgacggtccggccaatgaaagccggctctgcgtcaaggggcggttcggctttgactat
atcgaccacccgcaccggctgaccaaaccgctgatccgccgcgcggacgcgcccaagggg
ctgaacgtggatccgggcaatccgctcagccatttccgcgaggccagctgggaagaggcg
ctggattttgccgctcgcggtctggccgatctgcgcgcgcaaaagggcagctatgtcgcc
gggttcggcagcgccaaatgctcgaacgaagaggcctatctgttccagaagctgatccgc
cagggctttggccacaacaatgtcgaccattgcacccggctctgccatgcctcctcggtc
tcggcgctgctggagaatgtcggctcgggcgcggtgacggcgaccttcaacgagatcgag
aatgcggatgtggccatcgtgatcggctgcaacccgatcgagaaccatcccgtggcggcg
acctatttcaagcagttcaccaagcgcggcggcaagctgatcgtctgcgacccgcgcggc
gtcggcatgggccgctttgccacccaccggctgcagttcaagccgggcgcggatgtgtcg
atgctgaacgcgatgatgcacgtgatcgtcgaagaggggctgtatgaccaggcctatatc
gaccagttcaccgagaactgggaggagatgaaggcgcatctggccgattatagccctgag
aagatggagcccatctgcggcatcgcggccggtgagctgcgcgacgcggcgcgcacattt
gcggcgggcaaggcgggcatgatcttctggggcatgggcgtcagccagcatatccacggc
accgacaactcgcgctgcctgatctctctggcgctgatgaccggcaatgtgggcaagccc
ggcgcgggcctgcaccccctgcggggtcagaacaacgtgcagggcgcgtcggacgcgggc
ctgatcccgatgttcctgcccgattaccagtcggtcaccgatgacggcgtgcgctcggcc
tttacctctgtgtggaactcgggcgacttctcgaaccagaaggggctgaccgtggtcgag
atcatgcatgcgatccatgatggcgacatcaggggcatgtatatcctgggtgaaaacccg
gccatgtcggaccccgatgtcgaccatgcccgcgccgcgctggcgatgctcgagcatctg
gtggtgcaggatatcttcctgaccgagaccgcgaactatgccgatgtgatcctgcccgcc
agcgcctgggcggaaaagaccggcaccgtgaccaacaccaaccgccaggtccagatgggc
cgccccgccgtggcgcccccggggcaggcaaaggaagactggtggatcgaggtggaactg
gccaggcgcctcggcctcgactggaattacagccaccccagcgaagtgtttgccgagatg
aagcgcaacatgaaatcgctcgacaacatcacctgggcgcggctcgaaggcgaggcggtc
acctatccctcgctcagccccgaggatccgggccaggccatcgtctttggcgacggcttc
ccgcgtgcgaacaagcgggcccgcttcaccccggcgaagatcgtcgagcccgacgagcgc
cccgatgcggactatcccttcgtgctgatcaccgggcggcagctggaacattggcatacc
ggctcgatgacccggcgcgccagcgtgctcgacgcggtcgaacccgaggccaactgctcg
atgcaccccgccaccctgcgcgccatgggcatcgagcccggcgacatgatccgcctcacc
acacggcgcggcagcgtccaggtcatggtccgcgccgaccgcgccatcgcccaggacaac
gtcttcctccccttcgcctatgtcgaagccgccgcaaacatcctcacaaacgctgccctc
gacccttacggaaaaatcccagagttcaaatacgcagccgtaaaggtcgaaaaagctgaa
gcgctggcggcggagtag
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